Detail information of GWHGAAZE020818


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010660277.13.42393E-22PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
trEMBLtr|A5C6R2|A5C6R2_VITVI8E-18Putative uncharacterized protein {ECO:0000313|EMBL:CAN77665.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene2241496922415486-
GWHAAZE00000006mRNA2241496922415486-
GWHAAZE00000006exon2241526022415486-
GWHAAZE00000006exon2241496922415146-
GWHAAZE00000006CDS2241526022415486-
GWHAAZE00000006CDS2241496922415146-
Transcript Sequence

Network for GWHGAAZE020818

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0125


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.284
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.057
SRR3591709Stem0.066
SRR3591710White floral bud0.162
SRR3591711White flower0.499
SRR3591712Green floral bud0.260
SRR3591713Yellow flower0.184
SRP173429 SRR8316895Juvenile bud stage 2.499
SRR8316896Juvenile bud stage 1.537
SRR8316897Juvenile bud stage 1.416
SRR8316894Third green stage 1.150
SRR8316900Third green stage 1.527
SRR8316901Third green stage 1.764
SRR8316898Complete white stage 0.582
SRR8316899Complete white stage 3.953
SRR8316903Complete white stage 1.492
SRR8316902Silver flowering stage0.159
SRR8316904Silver flowering stage0.463
SRR8316905Silver flowering stage0.192
SRR8316906Gold flowering stage 0.131
SRR8316907Gold flowering stage 0.087
SRR8316908Gold flowering stage 0.789
SRP132670SRR6706286Control1.104
SRR6706287Light intensity 50%1.446
SRR6706288Light intensity 20%0.871
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.461
CNS0095593Slightly white alabastrum(diploid) 20.205
CNS0095594Slightly white alabastrum(diploid) 31.178
CNS0095595Whole white alabastrum(diploid) 20.103
CNS0095596Whole white alabastrum(diploid) 30.057
CNS0095597Whole white alabastrum(diploid) 40.597
CNS0095598Silvery flower (diploied) 11.970
CNS0095599Silvery flower (diploied) 22.599
CNS0095600Silvery flower (diploied) 31.553
CNS0095601Golden flower (diploid) 11.801
CNS0095602Golden flower (diploid) 22.841
CNS0095603Golden flower (diploid) 32.604
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 12.397
CRR073298Stem 21.174
CRR073299Stem 31.002
CRR073300Leaf 11.407
CRR073301Leaf 20.409
CRR073302Leaf 30.051
CRR073303Juvenile bud 10.257
CRR073304Juvenile bud 20.080
CRR073305Juvenile bud 31.002
CRR073306Third green 10.313
CRR073307Third green 20.066
CRR073308Third green 30.248
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.194
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.242
CRR073316Gold flowering 21.981
CRR073317Gold flowering 30.829
CRR073318Tawny withering 11.775
CRR073319Tawny withering 20.447
CRR073320Tawny withering 31.062