Detail information of GWHGAAZE020827


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010660268.11.40431E-35PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
trEMBLtr|F6H630|F6H630_VITVI5E-36Putative uncharacterized protein {ECO:0000313|EMBL:CCB47670.1}
TAIR10AT1G12280.10.000005LRR and NB-ARC domains-containing disease resistance protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene2267073822671241-
GWHAAZE00000006mRNA2267073822671241-
GWHAAZE00000006exon2267073822671241-
GWHAAZE00000006CDS2267073822671241-
Transcript Sequence

Network for GWHGAAZE020827

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0125


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.013
SRR3591706second leaf0.000
SRR3591707mature leaf0.081
SRR3591708Shoot apex0.117
SRR3591709Stem0.135
SRR3591710White floral bud0.432
SRR3591711White flower1.606
SRR3591712Green floral bud0.867
SRR3591713Yellow flower0.626
SRP173429 SRR8316895Juvenile bud stage 9.293
SRR8316896Juvenile bud stage 10.819
SRR8316897Juvenile bud stage 10.264
SRR8316894Third green stage 5.787
SRR8316900Third green stage 7.532
SRR8316901Third green stage 9.092
SRR8316898Complete white stage 4.070
SRR8316899Complete white stage 17.935
SRR8316903Complete white stage 10.742
SRR8316902Silver flowering stage1.020
SRR8316904Silver flowering stage3.573
SRR8316905Silver flowering stage1.611
SRR8316906Gold flowering stage 3.173
SRR8316907Gold flowering stage 2.908
SRR8316908Gold flowering stage 3.937
SRP132670SRR6706286Control10.267
SRR6706287Light intensity 50%12.447
SRR6706288Light intensity 20%9.964
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.266
CNS0095593Slightly white alabastrum(diploid) 21.012
CNS0095594Slightly white alabastrum(diploid) 33.473
CNS0095595Whole white alabastrum(diploid) 22.973
CNS0095596Whole white alabastrum(diploid) 30.218
CNS0095597Whole white alabastrum(diploid) 43.315
CNS0095598Silvery flower (diploied) 118.217
CNS0095599Silvery flower (diploied) 211.150
CNS0095600Silvery flower (diploied) 311.833
CNS0095601Golden flower (diploid) 114.128
CNS0095602Golden flower (diploid) 217.152
CNS0095603Golden flower (diploid) 320.493
CNS0095604Slightly white alabastrum(tetraploid) 10.005
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.014
CNS0095607Whole white alabastrum(tetraploid) 10.006
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.014
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.017
CNS0095612Silvery flower (tetraploid) 30.009
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.001
CNS0095615Golden flower (tetraploid) 30.074
CRA001975CRR073297Stem 116.647
CRR073298Stem 218.321
CRR073299Stem 37.650
CRR073300Leaf 110.566
CRR073301Leaf 28.701
CRR073302Leaf 33.874
CRR073303Juvenile bud 12.324
CRR073304Juvenile bud 22.204
CRR073305Juvenile bud 37.220
CRR073306Third green 10.649
CRR073307Third green 21.165
CRR073308Third green 31.200
CRR073309Second white 10.000
CRR073310Second white 20.505
CRR073311Second white 30.454
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 16.455
CRR073316Gold flowering 225.911
CRR073317Gold flowering 38.034
CRR073318Tawny withering 18.753
CRR073319Tawny withering 24.574
CRR073320Tawny withering 36.859