Detail information of GWHGAAZE020923


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002323915.20hypothetical protein POPTR_0017s04240g [Populus trichocarpa]
Swissprottr|Q9SYL0|BT3_ARATH8E-157BTB/POZ and TAZ domain-containing protein 3
trEMBLtr|B9IJ38|B9IJ38_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEF04048.2}
TAIR10AT1G05690.14E-119BTB and TAZ domain protein 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene2703897127045905-
GWHAAZE00000006mRNA2703897127045905-
GWHAAZE00000006exon2704556427045905-
GWHAAZE00000006exon2704511927045249-
GWHAAZE00000006exon2704294627043252-
GWHAAZE00000006exon2704072627041039-
GWHAAZE00000006exon2703897127039331-
GWHAAZE00000006CDS2704556427045905-
GWHAAZE00000006CDS2704511927045249-
GWHAAZE00000006CDS2704294627043252-
GWHAAZE00000006CDS2704072627041039-
GWHAAZE00000006CDS2703919927039331-
GWHAAZE00000006three_prime_UTR2703897127039198-
Transcript Sequence

Network for GWHGAAZE020923

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.32BTB871931.50E-10
PF02135.17zf-TAZ2793643.70E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTAZ
Ubiquitin Family3-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0005634cellular_componentnucleus
GO:0005515molecular_functionprotein binding
GO:0003712molecular_functiontranscription coregulator activity
GO:0004402molecular_functionhistone acetyltransferase activity
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf25.125
SRR3591706second leaf5.700
SRR3591707mature leaf4.778
SRR3591708Shoot apex6.484
SRR3591709Stem29.677
SRR3591710White floral bud34.017
SRR3591711White flower42.775
SRR3591712Green floral bud17.899
SRR3591713Yellow flower35.338
SRP173429 SRR8316895Juvenile bud stage 6.929
SRR8316896Juvenile bud stage 11.993
SRR8316897Juvenile bud stage 6.839
SRR8316894Third green stage 4.610
SRR8316900Third green stage 18.380
SRR8316901Third green stage 16.896
SRR8316898Complete white stage 31.544
SRR8316899Complete white stage 26.294
SRR8316903Complete white stage 47.410
SRR8316902Silver flowering stage26.760
SRR8316904Silver flowering stage31.185
SRR8316905Silver flowering stage13.673
SRR8316906Gold flowering stage 51.722
SRR8316907Gold flowering stage 48.669
SRR8316908Gold flowering stage 43.999
SRP132670SRR6706286Control12.053
SRR6706287Light intensity 50%12.743
SRR6706288Light intensity 20%11.122
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.172
CNS0095593Slightly white alabastrum(diploid) 213.256
CNS0095594Slightly white alabastrum(diploid) 313.541
CNS0095595Whole white alabastrum(diploid) 212.275
CNS0095596Whole white alabastrum(diploid) 312.101
CNS0095597Whole white alabastrum(diploid) 413.280
CNS0095598Silvery flower (diploied) 113.118
CNS0095599Silvery flower (diploied) 213.253
CNS0095600Silvery flower (diploied) 331.563
CNS0095601Golden flower (diploid) 115.255
CNS0095602Golden flower (diploid) 225.218
CNS0095603Golden flower (diploid) 322.240
CNS0095604Slightly white alabastrum(tetraploid) 110.951
CNS0095605Slightly white alabastrum(tetraploid) 211.062
CNS0095606Slightly white alabastrum(tetraploid) 38.599
CNS0095607Whole white alabastrum(tetraploid) 114.320
CNS0095608Whole white alabastrum(tetraploid) 211.512
CNS0095609Whole white alabastrum(tetraploid) 312.080
CNS0095610Silvery flower (tetraploid) 126.246
CNS0095611Silvery flower (tetraploid) 223.702
CNS0095612Silvery flower (tetraploid) 333.695
CNS0095613Golden flower (tetraploid) 115.379
CNS0095614Golden flower (tetraploid) 221.795
CNS0095615Golden flower (tetraploid) 328.061
CRA001975CRR073297Stem 117.145
CRR073298Stem 213.747
CRR073299Stem 314.361
CRR073300Leaf 121.997
CRR073301Leaf 223.043
CRR073302Leaf 319.262
CRR073303Juvenile bud 126.009
CRR073304Juvenile bud 231.064
CRR073305Juvenile bud 321.894
CRR073306Third green 145.636
CRR073307Third green 247.198
CRR073308Third green 344.172
CRR073309Second white 149.492
CRR073310Second white 271.703
CRR073311Second white 362.175
CRR073312Silver flowering 164.136
CRR073313Silver flowering 237.801
CRR073314Silver flowering 342.021
CRR073315Gold flowering 15.652
CRR073316Gold flowering 27.822
CRR073317Gold flowering 36.066
CRR073318Tawny withering 153.805
CRR073319Tawny withering 237.814
CRR073320Tawny withering 331.041