Detail information of GWHGAAZE020966


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002269448.10PREDICTED: U3 small nucleolar RNA-associated protein 21 homolog [Vitis vinifera]
COGYP_007119524.14E-19WD40 repeat-containing protein
Swissprottr|Q8W1K8|MUT11_CHLRE0.000000007Protein Mut11
trEMBLtr|D7THK7|D7THK7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI30523.3}
TAIR10AT4G04940.10transducin family protein / WD-40 repeat family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene2854231128550773-
GWHAAZE00000006mRNA2854231128550773-
GWHAAZE00000006exon2855069628550773-
GWHAAZE00000006exon2855006428550275-
GWHAAZE00000006exon2854867728548704-
GWHAAZE00000006exon2854769628547796-
GWHAAZE00000006exon2854698828547191-
GWHAAZE00000006exon2854538328545626-
GWHAAZE00000006exon2854476428544939-
GWHAAZE00000006exon2854388328543965-
GWHAAZE00000006exon2854283028542902-
GWHAAZE00000006exon2854231128542376-
GWHAAZE00000006five_prime_UTR2855069628550773-
GWHAAZE00000006five_prime_UTR2855019028550275-
GWHAAZE00000006CDS2855006428550189-
GWHAAZE00000006CDS2854867728548704-
GWHAAZE00000006CDS2854769628547796-
GWHAAZE00000006CDS2854698828547191-
GWHAAZE00000006CDS2854538328545626-
GWHAAZE00000006CDS2854476428544939-
GWHAAZE00000006CDS2854388328543965-
GWHAAZE00000006CDS2854283028542902-
GWHAAZE00000006CDS2854231128542376-
Transcript Sequence

Network for GWHGAAZE020966

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12894.8ANAPC4_WD401902589.20E-05
PF00400.33WD402652950.00074
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
K14554UTP21, WDR36 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.075
SRR3591706second leaf5.558
SRR3591707mature leaf3.278
SRR3591708Shoot apex8.273
SRR3591709Stem6.715
SRR3591710White floral bud8.449
SRR3591711White flower12.332
SRR3591712Green floral bud12.856
SRR3591713Yellow flower9.103
SRP173429 SRR8316895Juvenile bud stage 6.995
SRR8316896Juvenile bud stage 10.115
SRR8316897Juvenile bud stage 4.690
SRR8316894Third green stage 4.325
SRR8316900Third green stage 8.721
SRR8316901Third green stage 6.524
SRR8316898Complete white stage 1.217
SRR8316899Complete white stage 7.665
SRR8316903Complete white stage 3.898
SRR8316902Silver flowering stage3.256
SRR8316904Silver flowering stage7.122
SRR8316905Silver flowering stage2.915
SRR8316906Gold flowering stage 10.696
SRR8316907Gold flowering stage 12.999
SRR8316908Gold flowering stage 11.346
SRP132670SRR6706286Control12.152
SRR6706287Light intensity 50%12.059
SRR6706288Light intensity 20%13.996
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.135
CNS0095593Slightly white alabastrum(diploid) 22.290
CNS0095594Slightly white alabastrum(diploid) 31.647
CNS0095595Whole white alabastrum(diploid) 22.495
CNS0095596Whole white alabastrum(diploid) 32.927
CNS0095597Whole white alabastrum(diploid) 41.339
CNS0095598Silvery flower (diploied) 12.638
CNS0095599Silvery flower (diploied) 23.301
CNS0095600Silvery flower (diploied) 39.427
CNS0095601Golden flower (diploid) 13.419
CNS0095602Golden flower (diploid) 26.290
CNS0095603Golden flower (diploid) 36.610
CNS0095604Slightly white alabastrum(tetraploid) 14.251
CNS0095605Slightly white alabastrum(tetraploid) 23.236
CNS0095606Slightly white alabastrum(tetraploid) 312.759
CNS0095607Whole white alabastrum(tetraploid) 11.443
CNS0095608Whole white alabastrum(tetraploid) 21.140
CNS0095609Whole white alabastrum(tetraploid) 38.064
CNS0095610Silvery flower (tetraploid) 16.951
CNS0095611Silvery flower (tetraploid) 27.059
CNS0095612Silvery flower (tetraploid) 33.338
CNS0095613Golden flower (tetraploid) 11.779
CNS0095614Golden flower (tetraploid) 24.833
CNS0095615Golden flower (tetraploid) 34.620
CRA001975CRR073297Stem 111.555
CRR073298Stem 28.869
CRR073299Stem 38.332
CRR073300Leaf 18.504
CRR073301Leaf 27.014
CRR073302Leaf 37.208
CRR073303Juvenile bud 17.934
CRR073304Juvenile bud 23.917
CRR073305Juvenile bud 310.389
CRR073306Third green 14.373
CRR073307Third green 23.312
CRR073308Third green 33.938
CRR073309Second white 14.275
CRR073310Second white 25.391
CRR073311Second white 36.082
CRR073312Silver flowering 18.984
CRR073313Silver flowering 26.522
CRR073314Silver flowering 37.924
CRR073315Gold flowering 12.548
CRR073316Gold flowering 26.804
CRR073317Gold flowering 34.495
CRR073318Tawny withering 15.171
CRR073319Tawny withering 24.555
CRR073320Tawny withering 37.572