Detail information of GWHGAAZE020985


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAEY82696.10(3S)-linalool/(E)-nerolidol synthase [Vitis vinifera]
Swissprottr|P0CV94|NES1_FRAAN0(3S,6E)-nerolidol synthase 1
trEMBLtr|H6WBC5|H6WBC5_VITVI0(3S)-linalool/(E)-nerolidol synthase {ECO:0000313|EMBL:AEY82696.1}
TAIR10AT1G61680.19E-105terpene synthase 14

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene3018103530183190-
GWHAAZE00000006mRNA3018103530183190-
GWHAAZE00000006exon3018103530181313-
GWHAAZE00000006exon3018141330181595-
GWHAAZE00000006exon3018175830181896-
GWHAAZE00000006exon3018199130182209-
GWHAAZE00000006exon3018248830182863-
GWHAAZE00000006exon3018294730183190-
GWHAAZE00000006CDS3018294730183190-
GWHAAZE00000006CDS3018248830182863-
GWHAAZE00000006CDS3018199130182209-
GWHAAZE00000006CDS3018175830181896-
GWHAAZE00000006CDS3018141330181595-
GWHAAZE00000006CDS3018103530181313-
Transcript Sequence

Network for GWHGAAZE020985

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0179


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01397.22Terpene_synth141414.10E-38
PF03936.17Terpene_synth_C1853251.10E-49
PF03936.17Terpene_synth_C3274272.40E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14175NES1 Metabolic pathways map01100
Sesquiterpenoid and triterpenoid biosynthesismap00909

Gene Ontology

GO term OntologyName
GO:0010333molecular_functionterpene synthase activity
GO:0016829molecular_functionlyase activity
GO:0000287molecular_functionmagnesium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf59.956
SRR3591707mature leaf21.074
SRR3591708Shoot apex4.836
SRR3591709Stem0.133
SRR3591710White floral bud30.228
SRR3591711White flower59.147
SRR3591712Green floral bud5.701
SRR3591713Yellow flower66.344
SRP173429 SRR8316895Juvenile bud stage 2.311
SRR8316896Juvenile bud stage 0.572
SRR8316897Juvenile bud stage 0.949
SRR8316894Third green stage 0.053
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.134
SRR8316898Complete white stage 9.542
SRR8316899Complete white stage 8.495
SRR8316903Complete white stage 13.013
SRR8316902Silver flowering stage0.172
SRR8316904Silver flowering stage0.134
SRR8316905Silver flowering stage0.070
SRR8316906Gold flowering stage 0.205
SRR8316907Gold flowering stage 0.529
SRR8316908Gold flowering stage 0.768
SRP132670SRR6706286Control0.171
SRR6706287Light intensity 50%0.520
SRR6706288Light intensity 20%0.108
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.430
CNS0095593Slightly white alabastrum(diploid) 20.229
CNS0095594Slightly white alabastrum(diploid) 30.088
CNS0095595Whole white alabastrum(diploid) 20.168
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.445
CNS0095598Silvery flower (diploied) 11.638
CNS0095599Silvery flower (diploied) 21.368
CNS0095600Silvery flower (diploied) 30.444
CNS0095601Golden flower (diploid) 10.230
CNS0095602Golden flower (diploid) 20.291
CNS0095603Golden flower (diploid) 30.463
CNS0095604Slightly white alabastrum(tetraploid) 10.624
CNS0095605Slightly white alabastrum(tetraploid) 20.267
CNS0095606Slightly white alabastrum(tetraploid) 31.856
CNS0095607Whole white alabastrum(tetraploid) 10.323
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.016
CNS0095610Silvery flower (tetraploid) 12.189
CNS0095611Silvery flower (tetraploid) 22.717
CNS0095612Silvery flower (tetraploid) 31.692
CNS0095613Golden flower (tetraploid) 10.421
CNS0095614Golden flower (tetraploid) 23.260
CNS0095615Golden flower (tetraploid) 30.113
CRA001975CRR073297Stem 10.225
CRR073298Stem 20.454
CRR073299Stem 30.080
CRR073300Leaf 10.026
CRR073301Leaf 20.000
CRR073302Leaf 30.254
CRR073303Juvenile bud 10.005
CRR073304Juvenile bud 28.466
CRR073305Juvenile bud 30.301
CRR073306Third green 10.059
CRR073307Third green 20.040
CRR073308Third green 30.088
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.053
CRR073315Gold flowering 17.868
CRR073316Gold flowering 217.257
CRR073317Gold flowering 314.896
CRR073318Tawny withering 10.053
CRR073319Tawny withering 20.358
CRR073320Tawny withering 30.043