Detail information of GWHGAAZE021012


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011099683.11.24684E-86PREDICTED: NAC domain-containing protein 2-like [Sesamum indicum]
Swissprottr|Q9C598|NAC81_ARATH2E-77Protein ATAF2
trEMBLtr|F6H4F0|F6H4F0_VITVI2E-86Putative uncharacterized protein {ECO:0000313|EMBL:CCB47161.1}
TAIR10AT5G08790.13E-64NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene3112409631125370+
GWHAAZE00000006mRNA3112409631125370+
GWHAAZE00000006exon3112409631124374+
GWHAAZE00000006exon3112458931125019+
GWHAAZE00000006exon3112511031125170+
GWHAAZE00000006exon3112525131125370+
GWHAAZE00000006CDS3112409631124374+
GWHAAZE00000006CDS3112458931125019+
GWHAAZE00000006CDS3112511031125170+
GWHAAZE00000006CDS3112525131125370+
Transcript Sequence

Network for GWHGAAZE021012

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.16NAM3771.40E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003677molecular_functionDNA binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE021012.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 3020406080100120140160180200220240Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf58.119
SRR3591706second leaf11.563
SRR3591707mature leaf6.781
SRR3591708Shoot apex17.371
SRR3591709Stem27.985
SRR3591710White floral bud22.046
SRR3591711White flower52.870
SRR3591712Green floral bud12.001
SRR3591713Yellow flower59.091
SRP173429 SRR8316895Juvenile bud stage 140.815
SRR8316896Juvenile bud stage 113.446
SRR8316897Juvenile bud stage 91.444
SRR8316894Third green stage 11.991
SRR8316900Third green stage 24.094
SRR8316901Third green stage 81.562
SRR8316898Complete white stage 1.375
SRR8316899Complete white stage 87.288
SRR8316903Complete white stage 3.229
SRR8316902Silver flowering stage8.386
SRR8316904Silver flowering stage17.874
SRR8316905Silver flowering stage8.944
SRR8316906Gold flowering stage 29.703
SRR8316907Gold flowering stage 17.642
SRR8316908Gold flowering stage 39.428
SRP132670SRR6706286Control12.017
SRR6706287Light intensity 50%15.287
SRR6706288Light intensity 20%9.013
CNP0000432CNS0095592Slightly white alabastrum(diploid) 160.836
CNS0095593Slightly white alabastrum(diploid) 2130.842
CNS0095594Slightly white alabastrum(diploid) 3100.071
CNS0095595Whole white alabastrum(diploid) 2101.517
CNS0095596Whole white alabastrum(diploid) 310.914
CNS0095597Whole white alabastrum(diploid) 455.175
CNS0095598Silvery flower (diploied) 1133.523
CNS0095599Silvery flower (diploied) 2218.464
CNS0095600Silvery flower (diploied) 381.001
CNS0095601Golden flower (diploid) 1200.753
CNS0095602Golden flower (diploid) 2169.917
CNS0095603Golden flower (diploid) 3161.620
CNS0095604Slightly white alabastrum(tetraploid) 10.981
CNS0095605Slightly white alabastrum(tetraploid) 20.817
CNS0095606Slightly white alabastrum(tetraploid) 32.004
CNS0095607Whole white alabastrum(tetraploid) 11.126
CNS0095608Whole white alabastrum(tetraploid) 20.315
CNS0095609Whole white alabastrum(tetraploid) 31.617
CNS0095610Silvery flower (tetraploid) 128.812
CNS0095611Silvery flower (tetraploid) 221.089
CNS0095612Silvery flower (tetraploid) 318.949
CNS0095613Golden flower (tetraploid) 121.216
CNS0095614Golden flower (tetraploid) 227.275
CNS0095615Golden flower (tetraploid) 312.637
CRA001975CRR073297Stem 154.431
CRR073298Stem 274.236
CRR073299Stem 347.640
CRR073300Leaf 1153.636
CRR073301Leaf 2213.623
CRR073302Leaf 357.726
CRR073303Juvenile bud 140.915
CRR073304Juvenile bud 2102.687
CRR073305Juvenile bud 3130.292
CRR073306Third green 145.212
CRR073307Third green 242.973
CRR073308Third green 330.786
CRR073309Second white 117.379
CRR073310Second white 238.283
CRR073311Second white 326.066
CRR073312Silver flowering 151.081
CRR073313Silver flowering 218.835
CRR073314Silver flowering 316.727
CRR073315Gold flowering 143.265
CRR073316Gold flowering 277.283
CRR073317Gold flowering 359.814
CRR073318Tawny withering 119.497
CRR073319Tawny withering 2101.910
CRR073320Tawny withering 314.895