Detail information of GWHGAAZE021016


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN73659.13.0334E-173hypothetical protein VITISV_044129 [Vitis vinifera]
COGYP_007126219.12E-90Aldehyde Dehydrogenase
Swissprottr|Q70DU8|AL3H1_ARATH4E-151Aldehyde dehydrogenase family 3 member H1
trEMBLtr|A5AQ13|A5AQ13_VITVI1E-173Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}
TAIR10AT1G44170.32E-123aldehyde dehydrogenase 3H1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene3121251531217234-
GWHAAZE00000006mRNA3121251531217234-
GWHAAZE00000006exon3121251531212754-
GWHAAZE00000006exon3121332431213491-
GWHAAZE00000006exon3121374631213836-
GWHAAZE00000006exon3121416131214333-
GWHAAZE00000006exon3121532031215435-
GWHAAZE00000006exon3121565831215864-
GWHAAZE00000006exon3121719831217234-
GWHAAZE00000006CDS3121719831217234-
GWHAAZE00000006CDS3121565831215864-
GWHAAZE00000006CDS3121532031215435-
GWHAAZE00000006CDS3121416131214333-
GWHAAZE00000006CDS3121374631213836-
GWHAAZE00000006CDS3121332431213491-
GWHAAZE00000006CDS3121251531212754-
Transcript Sequence

Network for GWHGAAZE021016

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00171.23Aldedh51191.90E-24
PF00171.23Aldedh1382983.10E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00128ALDH Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Glycolysis / Gluconeogenesismap00010
Ascorbate and aldarate metabolismmap00053
Pyruvate metabolismmap00620
Fatty acid degradationmap00071
Glycerolipid metabolismmap00561
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Arginine and proline metabolismmap00330
Histidine metabolismmap00340
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Insect hormone biosynthesismap00981
Limonene and pinene degradationmap00903
Chloroalkane and chloroalkene degradationmap00625

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.424
SRR3591706second leaf0.745
SRR3591707mature leaf0.620
SRR3591708Shoot apex2.654
SRR3591709Stem5.459
SRR3591710White floral bud5.455
SRR3591711White flower2.490
SRR3591712Green floral bud4.382
SRR3591713Yellow flower1.187
SRP173429 SRR8316895Juvenile bud stage 2.344
SRR8316896Juvenile bud stage 2.932
SRR8316897Juvenile bud stage 0.760
SRR8316894Third green stage 1.751
SRR8316900Third green stage 4.029
SRR8316901Third green stage 4.730
SRR8316898Complete white stage 1.560
SRR8316899Complete white stage 12.514
SRR8316903Complete white stage 4.747
SRR8316902Silver flowering stage1.646
SRR8316904Silver flowering stage3.100
SRR8316905Silver flowering stage0.642
SRR8316906Gold flowering stage 2.171
SRR8316907Gold flowering stage 1.955
SRR8316908Gold flowering stage 1.720
SRP132670SRR6706286Control2.123
SRR6706287Light intensity 50%1.641
SRR6706288Light intensity 20%2.378
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.302
CNS0095593Slightly white alabastrum(diploid) 23.512
CNS0095594Slightly white alabastrum(diploid) 33.055
CNS0095595Whole white alabastrum(diploid) 23.450
CNS0095596Whole white alabastrum(diploid) 31.877
CNS0095597Whole white alabastrum(diploid) 44.344
CNS0095598Silvery flower (diploied) 11.623
CNS0095599Silvery flower (diploied) 22.359
CNS0095600Silvery flower (diploied) 32.766
CNS0095601Golden flower (diploid) 12.976
CNS0095602Golden flower (diploid) 22.228
CNS0095603Golden flower (diploid) 31.851
CNS0095604Slightly white alabastrum(tetraploid) 17.008
CNS0095605Slightly white alabastrum(tetraploid) 24.821
CNS0095606Slightly white alabastrum(tetraploid) 39.769
CNS0095607Whole white alabastrum(tetraploid) 14.305
CNS0095608Whole white alabastrum(tetraploid) 23.431
CNS0095609Whole white alabastrum(tetraploid) 34.533
CNS0095610Silvery flower (tetraploid) 15.877
CNS0095611Silvery flower (tetraploid) 22.757
CNS0095612Silvery flower (tetraploid) 33.040
CNS0095613Golden flower (tetraploid) 11.668
CNS0095614Golden flower (tetraploid) 22.524
CNS0095615Golden flower (tetraploid) 31.127
CRA001975CRR073297Stem 11.259
CRR073298Stem 20.828
CRR073299Stem 30.548
CRR073300Leaf 12.889
CRR073301Leaf 21.983
CRR073302Leaf 30.618
CRR073303Juvenile bud 11.815
CRR073304Juvenile bud 20.744
CRR073305Juvenile bud 31.804
CRR073306Third green 11.204
CRR073307Third green 20.896
CRR073308Third green 30.441
CRR073309Second white 10.210
CRR073310Second white 20.214
CRR073311Second white 30.386
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.365
CRR073314Silver flowering 30.180
CRR073315Gold flowering 10.086
CRR073316Gold flowering 20.781
CRR073317Gold flowering 30.120
CRR073318Tawny withering 11.033
CRR073319Tawny withering 22.632
CRR073320Tawny withering 31.912