Detail information of GWHGAAZE021053


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009614613.17.6221E-21PREDICTED: mRNA cap guanine-N7 methyltransferase 1 isoform X2 [Nicotiana tomentosiformis]
Swissprottr|Q9LHQ7|MCES1_ARATH1E-18mRNA cap guanine-N7 methyltransferase 1
trEMBLtr|K4CQ20|K4CQ20_SOLLC2E-20mRNA cap guanine-N7 methyltransferase {ECO:0000256|PIRNR:PIRNR028762}
TAIR10AT3G20650.21E-15mRNA capping enzyme family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene3339586133397994-
GWHAAZE00000006mRNA3339586133397994-
GWHAAZE00000006exon3339793633397994-
GWHAAZE00000006exon3339774033397806-
GWHAAZE00000006exon3339688733396949-
GWHAAZE00000006exon3339630133396425-
GWHAAZE00000006exon3339586133395943-
GWHAAZE00000006five_prime_UTR3339793633397994-
GWHAAZE00000006five_prime_UTR3339774033397806-
GWHAAZE00000006five_prime_UTR3339688733396949-
GWHAAZE00000006five_prime_UTR3339639233396425-
GWHAAZE00000006CDS3339630133396391-
GWHAAZE00000006CDS3339586133395943-
Transcript Sequence

Network for GWHGAAZE021053

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00565RNMT mRNA surveillance pathway map03015

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 4.047
SRR8316896Juvenile bud stage 7.412
SRR8316897Juvenile bud stage 0.750
SRR8316894Third green stage 4.635
SRR8316900Third green stage 11.092
SRR8316901Third green stage 6.754
SRR8316898Complete white stage 3.346
SRR8316899Complete white stage 10.733
SRR8316903Complete white stage 1.590
SRR8316902Silver flowering stage5.738
SRR8316904Silver flowering stage9.523
SRR8316905Silver flowering stage4.044
SRR8316906Gold flowering stage 14.664
SRR8316907Gold flowering stage 19.294
SRR8316908Gold flowering stage 6.998
SRP132670SRR6706286Control5.469
SRR6706287Light intensity 50%9.735
SRR6706288Light intensity 20%9.679
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.337
CNS0095593Slightly white alabastrum(diploid) 26.106
CNS0095594Slightly white alabastrum(diploid) 35.522
CNS0095595Whole white alabastrum(diploid) 25.995
CNS0095596Whole white alabastrum(diploid) 38.016
CNS0095597Whole white alabastrum(diploid) 44.232
CNS0095598Silvery flower (diploied) 11.731
CNS0095599Silvery flower (diploied) 21.889
CNS0095600Silvery flower (diploied) 33.550
CNS0095601Golden flower (diploid) 12.186
CNS0095602Golden flower (diploid) 21.160
CNS0095603Golden flower (diploid) 31.050
CNS0095604Slightly white alabastrum(tetraploid) 10.088
CNS0095605Slightly white alabastrum(tetraploid) 20.402
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.133
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.126
CRA001975CRR073297Stem 18.118
CRR073298Stem 24.319
CRR073299Stem 32.291
CRR073300Leaf 16.210
CRR073301Leaf 25.567
CRR073302Leaf 33.926
CRR073303Juvenile bud 13.547
CRR073304Juvenile bud 22.817
CRR073305Juvenile bud 32.219
CRR073306Third green 13.028
CRR073307Third green 21.840
CRR073308Third green 31.619
CRR073309Second white 13.334
CRR073310Second white 26.390
CRR073311Second white 33.512
CRR073312Silver flowering 12.349
CRR073313Silver flowering 21.174
CRR073314Silver flowering 32.742
CRR073315Gold flowering 15.365
CRR073316Gold flowering 22.531
CRR073317Gold flowering 30.366
CRR073318Tawny withering 13.215
CRR073319Tawny withering 23.033
CRR073320Tawny withering 33.539