Gene detail

Detail information of GWHGAAZE021115

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002263700.1	0	PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Vitis vinifera]
COG	YP_007421411.1	4E-14	Glycosyltransferase, MGT
Swissprot	tr\|F8WKW0\|UGT1_GARJA	0	Crocetin glucosyltransferase, chloroplastic (Precursor)
trEMBL	tr\|F6I4F4\|F6I4F4_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB61791.1}
TAIR10	AT4G15550.1	8E-116	indole-3-acetate beta-D-glucosyltransferase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	35329842	35331230	+
GWHAAZE00000006	mRNA	35329842	35331230	+
GWHAAZE00000006	exon	35329842	35330303	+
GWHAAZE00000006	exon	35330337	35331230	+
GWHAAZE00000006	CDS	35329842	35330303	+
GWHAAZE00000006	CDS	35330337	35331230	+

Transcript Sequence
>GWHTAAZE021139 ATGGCCGGCCGGCGCGTCCTTCTAGTGACATTTCCGGGGCAGGGGCACATAAATCCATCCCTCCAATTCGCTAAGCGCCTCATAGAAATGGGTGTCGAGGTCACCTTCTGCACCAGCCAATCGGCTATTGATCGTATAGCCAAAACCGAAACCGAAACTACAATCCCACAAGGCCTAACCCTCTCTCCCTTCTTCGACAGCTACGAAAACGGCCTACAGCCTGGTGTTGACGTTGAACACTACATATCCGACGTCAAAAACCATGGTTCACAACACATAGCCAAACTTATTACCACCAGTGCAAACGAAGGCAAACCTTTCGCCCAAGTGGTCTACACCACCCTAATTCCTTGGGCAGGTCGAGTGGCTCATCATCTATGTATGCCATGTACCCTTCTTTGGATCCAACCAGCCACCATTTTCGACATATTTTACTATTACTTCAATGGGTATGGTGATGTTATTCAATTACCAGGATTGCCACCCCTCACTAGCCATGACCTTCCATCTTTTCTTCTTTCCTCAGACACATACAACTTTGCTCTCCCATCTTTCAAAGAACAATTTGATATCATTGAGGAAGAAACTAACCCTAATATACTCGTAAACACTTTCGACATGTTAGAGTTCGAATTCCTAAGAAATATAGAGAAGCTCAAAATGAAGGCAATCGGACCGTTGATGCCTCTGGCTTTCTTGGATGGAAAAGACCCTTCCAACAAATCATTCGGTGGAGATCTCTTCCAAAAATCTATAAACTACATTGAATGGTTGGATTCAAAAACCGAATCATCGGTAGTTTACATATCATTCGGAAGCATCTTAGTATTATCGAGTAAGCAAATTGAAGAGATCGGGCAGGCGTTGCTTCAGAGCTGCCGACCATTCTTGTGGGTGATAAGAGAAGATAGGAACGAGGCGAAAAAACAAGAAGACGAGATGAATTTTAGTGACGAGTTGAAAGAAGTAGGGATGATAGTGCCATGGTGCTCGCAAGTGGAGGTTCTATCGCATAAATCAGTCGGGTGTTTCGTGACGCATTGTGGATGGAACTCGACACTGGAGAGCGTGACATTTGGGATACCAATGGTGGCGTTCCCTCAGTGGATTGATCAAACGACAAACGCGAAGCTTATTGAGGATGTGTGGAAGACAGGGGTAAGAGTGAAGCCAAATGAAGAAGGGATAGTGGAGAGGAGTGAGATGAAGGAATGCATAGAAATAGTGATGGGAGATGGAGAGAGAGGAGATGAAGCGAGAAAGAATGCTAAGAAATGGAAGGATTTGGCAAAGGAAGCTGTGGAAGAAGGTGGATCTTCACGTTTGAATCTAAAGGCTTTCGTAGATGAGATTTGA

Network for GWHGAAZE021115

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0168

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00201.19	UDPGT	253	389	9.60E-25

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016758	molecular_function	transferase activity, transferring hexosyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.124
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.215
	SRR3591711	White flower	0.131
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.182
SRP173429	SRR8316895	Juvenile bud stage	0.033
	SRR8316896	Juvenile bud stage	0.004
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.004
	SRR8316900	Third green stage	0.031
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.075
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.189
	SRR8316902	Silver flowering stage	0.042
	SRR8316904	Silver flowering stage	0.076
	SRR8316905	Silver flowering stage	0.136
	SRR8316906	Gold flowering stage	0.417
	SRR8316907	Gold flowering stage	0.965
	SRR8316908	Gold flowering stage	0.250
SRP132670	SRR6706286	Control	0.064
	SRR6706287	Light intensity 50%	0.005
	SRR6706288	Light intensity 20%	0.021
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.218
	CNS0095593	Slightly white alabastrum(diploid) 2	0.129
	CNS0095594	Slightly white alabastrum(diploid) 3	0.586
	CNS0095595	Whole white alabastrum(diploid) 2	0.965
	CNS0095596	Whole white alabastrum(diploid) 3	0.007
	CNS0095597	Whole white alabastrum(diploid) 4	0.835
	CNS0095598	Silvery flower (diploied) 1	0.824
	CNS0095599	Silvery flower (diploied) 2	4.157
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.050
	CNS0095602	Golden flower (diploid) 2	0.223
	CNS0095603	Golden flower (diploid) 3	0.171
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.006
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.083
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.014
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.133
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.030
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.131
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.159
	CNS0095613	Golden flower (tetraploid) 1	0.178
	CNS0095614	Golden flower (tetraploid) 2	0.057
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.023
	CRR073298	Stem 2	0.014
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.111
	CRR073301	Leaf 2	0.046
	CRR073302	Leaf 3	0.024
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.049
	CRR073305	Juvenile bud 3	0.056
	CRR073306	Third green 1	0.015
	CRR073307	Third green 2	0.001
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	1.090
	CRR073311	Second white 3	0.090
	CRR073312	Silver flowering 1	0.218
	CRR073313	Silver flowering 2	0.574
	CRR073314	Silver flowering 3	0.664
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.004