Gene detail

Detail information of GWHGAAZE021133

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002263700.1	0	PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Vitis vinifera]
COG	YP_001105798.1	0.0000001	antibiotic resistance macrolide glycosyltransferase
Swissprot	tr\|F8WKW0\|UGT1_GARJA	8E-179	Crocetin glucosyltransferase, chloroplastic (Precursor)
trEMBL	tr\|F6I4F4\|F6I4F4_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB61791.1}
TAIR10	AT4G15550.1	1E-116	indole-3-acetate beta-D-glucosyltransferase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	35640558	35641940	+
GWHAAZE00000006	mRNA	35640558	35641940	+
GWHAAZE00000006	exon	35640558	35641940	+
GWHAAZE00000006	CDS	35640558	35641940	+

Transcript Sequence
>GWHTAAZE021157 ATGGCCGGCCCTCGCGTCCTTGTAGTGACATTTCGGGCAGGGGCACATAAACCCATCCCTCCACTCGCCAAGCCTCATAAAATGGGCGTCGAGGTCACCTTCTCCACCAGCCAATCGGCCATTAATCGAATATCCAAAAGCAAAACTGACACAACAATCCCACAAGGCCTAACCCTCTCTCCCTTCTTGGACGGCTACGAAAACGGCCTACAGCCTGGTGTTGACGTTGAACACTACATATCCGAGGTGAAAAAGCATGGTTCACAACATATAGCTGAACTTATAACCACCGGTGCAACAGAAGGCAAACCTTTCGCCCAAGTGGTCTACACTACCTTAATTTCTTGGGCCGGTCGAGTGGCTCATCGTCTCTGTGTGCCATGTACACTTCTGTGGATCCAACCAGCCACCATTTTTGATATCTATTACTATTACTTCAATGGGTACGGTGATGTTATTAGTAAAAGTAATAATGACCCCTCGTCTTCGATTCAATTACCGGGATTGCCACTCCTCACTAGTCATGACCTTCCATCTTTCCTTCTTTCCTCAAACACATACAACTTTGCTCTCCCAGCTTTCAAAGAACACTTCAATATAATCGAGGAAGAAACCAACCCTAATATACTCGTGAATACGTTCGACGCGTTGGAGTTTGGATTCCTAAGAACTACGCAGAAGCTCAAAATGAAGGCAATCGGACCATTGATGCCATCGGCTTTCCTGGACGGGAAAGACCCTTCCGACAAATCATTCCGTGGAGATCTTTTCCAAAAATCAAGAAACTATATTGAATGGTTGGATTCGAAAACCGAATCATCGGTCGTTTACATATCATTCGGAAGCATCTCAGTATTATCGAGCAAACAAATCGAAGAGATCGGGCAGGTGTTGCTTCAGAGCAGCCGACCGTTCTTGTGGGTAATAAGAGAAGACAATAACGGGGCGAAAAAACAAGAAGGCGAGATGAATTTTAGCGATAAGTTGAAAGAGTTAGGGATGATAGTGCCATGGTGCTCGCAAGTGGAGGTTCTTTCGCACAAATCAGTGGGGTGTTTCGTGACGCATTGTGGATGGAACTCGACACTGGAGAGTGTGACTTGTGGGATACCGATGGTGGCATTTCCTCAGTGGACGGATCAAGCGACAAATGCGAAGCTTATTGAGGATGTGTGGAATACAGGAGTGAGAGTAAAGCCAAATGAAGAAGGGATAGTGGAGAGAAGTGAGATGAAGGAGTGCATAGAAATGGTGATGGGAGATGGAGAAAGAGGACATGCAGTGAGAAAGAATGCTAAGAAATGGAAGGATTTGGCAAAGGAAGCAGTGGAAGAAGGTGGATCTTCACACTTGAATCTAAAGGCTTTTGTGGATGAGATTTGA

Network for GWHGAAZE021133

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0168

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00201.19	UDPGT	260	398	2.50E-24

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016758	molecular_function	transferase activity, transferring hexosyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.032
	SRR3591707	mature leaf	0.008
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.013
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.003
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.005
	SRR8316898	Complete white stage	0.002
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.026
	SRR8316904	Silver flowering stage	0.005
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.067
	SRR8316907	Gold flowering stage	0.144
	SRR8316908	Gold flowering stage	0.032
SRP132670	SRR6706286	Control	0.005
	SRR6706287	Light intensity 50%	0.022
	SRR6706288	Light intensity 20%	0.021
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.064
	CNS0095593	Slightly white alabastrum(diploid) 2	0.194
	CNS0095594	Slightly white alabastrum(diploid) 3	0.112
	CNS0095595	Whole white alabastrum(diploid) 2	0.199
	CNS0095596	Whole white alabastrum(diploid) 3	0.006
	CNS0095597	Whole white alabastrum(diploid) 4	0.002
	CNS0095598	Silvery flower (diploied) 1	0.115
	CNS0095599	Silvery flower (diploied) 2	2.053
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.022
	CNS0095603	Golden flower (diploid) 3	0.159
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.013
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.017
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.010
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.008
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.020
	CNS0095613	Golden flower (tetraploid) 1	0.145
	CNS0095614	Golden flower (tetraploid) 2	0.123
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.004
	CRR073298	Stem 2	0.004
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.020
	CRR073302	Leaf 3	0.037
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.011
	CRR073305	Juvenile bud 3	0.011
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.004
	CRR073309	Second white 1	0.158
	CRR073310	Second white 2	0.076
	CRR073311	Second white 3	0.019
	CRR073312	Silver flowering 1	0.042
	CRR073313	Silver flowering 2	0.004
	CRR073314	Silver flowering 3	0.389
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.009
	CRR073320	Tawny withering 3	0.000