Detail information of GWHGAAZE021188


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAH69227.11.5789E-108putative adenosylhomocysteinase [Nicotiana glauca]
COGYP_007041705.17E-69Adenosylhomocysteinase
Swissprottr|P68173|SAHH_TOBAC7E-108Adenosylhomocysteinase
trEMBLtr|Q5W1I5|Q5W1I5_NICGL6E-109Putative adenosylhomocysteinase {ECO:0000313|EMBL:CAH69227.1} (Fragment)
TAIR10AT4G13940.37E-75S-adenosyl-L-homocysteine hydrolase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene3803200438032468+
GWHAAZE00000006mRNA3803200438032468+
GWHAAZE00000006exon3803200438032468+
GWHAAZE00000006CDS3803200438032468+
Transcript Sequence

Network for GWHGAAZE021188

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00670.22AdoHcyase_NAD2722.70E-26
PF05221.18AdoHcyase211532.50E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01251E3.3.1.1, ahcY Metabolic pathways map01100
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1310.221
SRR3591706second leaf562.264
SRR3591707mature leaf177.901
SRR3591708Shoot apex579.193
SRR3591709Stem2550.351
SRR3591710White floral bud545.956
SRR3591711White flower501.526
SRR3591712Green floral bud1382.854
SRR3591713Yellow flower434.287
SRP173429 SRR8316895Juvenile bud stage 349.519
SRR8316896Juvenile bud stage 374.557
SRR8316897Juvenile bud stage 280.856
SRR8316894Third green stage 169.511
SRR8316900Third green stage 563.294
SRR8316901Third green stage 524.228
SRR8316898Complete white stage 152.622
SRR8316899Complete white stage 295.561
SRR8316903Complete white stage 147.669
SRR8316902Silver flowering stage93.450
SRR8316904Silver flowering stage102.630
SRR8316905Silver flowering stage50.578
SRR8316906Gold flowering stage 130.707
SRR8316907Gold flowering stage 136.818
SRR8316908Gold flowering stage 416.809
SRP132670SRR6706286Control435.463
SRR6706287Light intensity 50%469.824
SRR6706288Light intensity 20%479.840
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1385.376
CNS0095593Slightly white alabastrum(diploid) 2362.397
CNS0095594Slightly white alabastrum(diploid) 3398.255
CNS0095595Whole white alabastrum(diploid) 2295.699
CNS0095596Whole white alabastrum(diploid) 3364.277
CNS0095597Whole white alabastrum(diploid) 4243.214
CNS0095598Silvery flower (diploied) 1177.810
CNS0095599Silvery flower (diploied) 2155.006
CNS0095600Silvery flower (diploied) 3149.598
CNS0095601Golden flower (diploid) 1103.242
CNS0095602Golden flower (diploid) 2184.529
CNS0095603Golden flower (diploid) 3176.948
CNS0095604Slightly white alabastrum(tetraploid) 1471.688
CNS0095605Slightly white alabastrum(tetraploid) 2434.918
CNS0095606Slightly white alabastrum(tetraploid) 3449.016
CNS0095607Whole white alabastrum(tetraploid) 1353.356
CNS0095608Whole white alabastrum(tetraploid) 2297.616
CNS0095609Whole white alabastrum(tetraploid) 3449.153
CNS0095610Silvery flower (tetraploid) 1118.003
CNS0095611Silvery flower (tetraploid) 292.075
CNS0095612Silvery flower (tetraploid) 344.783
CNS0095613Golden flower (tetraploid) 1141.846
CNS0095614Golden flower (tetraploid) 2158.037
CNS0095615Golden flower (tetraploid) 344.425
CRA001975CRR073297Stem 1776.463
CRR073298Stem 2627.928
CRR073299Stem 3880.031
CRR073300Leaf 1678.510
CRR073301Leaf 2745.349
CRR073302Leaf 31027.890
CRR073303Juvenile bud 1745.536
CRR073304Juvenile bud 21245.191
CRR073305Juvenile bud 3652.699
CRR073306Third green 1571.192
CRR073307Third green 2451.001
CRR073308Third green 3428.951
CRR073309Second white 1145.154
CRR073310Second white 275.763
CRR073311Second white 351.208
CRR073312Silver flowering 1147.319
CRR073313Silver flowering 2208.615
CRR073314Silver flowering 3166.248
CRR073315Gold flowering 170.089
CRR073316Gold flowering 2102.151
CRR073317Gold flowering 399.964
CRR073318Tawny withering 1750.699
CRR073319Tawny withering 2557.985
CRR073320Tawny withering 3950.252