Detail information of GWHGAAZE021346


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010650316.10PREDICTED: methyltransferase-like protein 13 [Vitis vinifera]
COGYP_634370.13E-12hypothetical protein MXAN_6241
trEMBLtr|A0A067L4C0|A0A067L4C0_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP39345.1}
TAIR10AT2G31740.19E-180S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene4907916849102172-
GWHAAZE00000006mRNA4907916849102172-
GWHAAZE00000006exon4907916849079590-
GWHAAZE00000006exon4907975549079905-
GWHAAZE00000006exon4908836549088567-
GWHAAZE00000006exon4908970149089775-
GWHAAZE00000006exon4908985549089935-
GWHAAZE00000006exon4909025149090372-
GWHAAZE00000006exon4909235649092632-
GWHAAZE00000006exon4909383649093884-
GWHAAZE00000006exon4909430849094372-
GWHAAZE00000006exon4909446749094514-
GWHAAZE00000006exon4909461849094701-
GWHAAZE00000006exon4909826949098529-
GWHAAZE00000006exon4909918249099363-
GWHAAZE00000006exon4909961549099681-
GWHAAZE00000006exon4909981149099912-
GWHAAZE00000006exon4910211949102172-
GWHAAZE00000006CDS4910211949102172-
GWHAAZE00000006CDS4909981149099912-
GWHAAZE00000006CDS4909961549099681-
GWHAAZE00000006CDS4909918249099363-
GWHAAZE00000006CDS4909826949098529-
GWHAAZE00000006CDS4909461849094701-
GWHAAZE00000006CDS4909446749094514-
GWHAAZE00000006CDS4909430849094372-
GWHAAZE00000006CDS4909383649093884-
GWHAAZE00000006CDS4909235649092632-
GWHAAZE00000006CDS4909025149090372-
GWHAAZE00000006CDS4908985549089935-
GWHAAZE00000006CDS4908970149089775-
GWHAAZE00000006CDS4908836549088567-
GWHAAZE00000006CDS4907975549079905-
GWHAAZE00000006CDS4907938749079590-
GWHAAZE00000006three_prime_UTR4907916849079386-
Transcript Sequence

Network for GWHGAAZE021346

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.684
SRR3591706second leaf2.042
SRR3591707mature leaf2.999
SRR3591708Shoot apex3.256
SRR3591709Stem3.213
SRR3591710White floral bud1.307
SRR3591711White flower2.455
SRR3591712Green floral bud1.955
SRR3591713Yellow flower1.440
SRP173429 SRR8316895Juvenile bud stage 6.690
SRR8316896Juvenile bud stage 11.088
SRR8316897Juvenile bud stage 0.624
SRR8316894Third green stage 3.766
SRR8316900Third green stage 11.507
SRR8316901Third green stage 11.172
SRR8316898Complete white stage 2.475
SRR8316899Complete white stage 11.864
SRR8316903Complete white stage 4.959
SRR8316902Silver flowering stage2.465
SRR8316904Silver flowering stage4.750
SRR8316905Silver flowering stage1.650
SRR8316906Gold flowering stage 5.680
SRR8316907Gold flowering stage 6.018
SRR8316908Gold flowering stage 2.217
SRP132670SRR6706286Control7.253
SRR6706287Light intensity 50%7.838
SRR6706288Light intensity 20%8.072
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.460
CNS0095593Slightly white alabastrum(diploid) 27.515
CNS0095594Slightly white alabastrum(diploid) 37.623
CNS0095595Whole white alabastrum(diploid) 26.093
CNS0095596Whole white alabastrum(diploid) 37.325
CNS0095597Whole white alabastrum(diploid) 46.338
CNS0095598Silvery flower (diploied) 17.458
CNS0095599Silvery flower (diploied) 25.258
CNS0095600Silvery flower (diploied) 39.293
CNS0095601Golden flower (diploid) 18.316
CNS0095602Golden flower (diploid) 29.015
CNS0095603Golden flower (diploid) 37.874
CNS0095604Slightly white alabastrum(tetraploid) 12.521
CNS0095605Slightly white alabastrum(tetraploid) 22.375
CNS0095606Slightly white alabastrum(tetraploid) 33.585
CNS0095607Whole white alabastrum(tetraploid) 11.185
CNS0095608Whole white alabastrum(tetraploid) 21.028
CNS0095609Whole white alabastrum(tetraploid) 32.323
CNS0095610Silvery flower (tetraploid) 12.292
CNS0095611Silvery flower (tetraploid) 22.222
CNS0095612Silvery flower (tetraploid) 31.887
CNS0095613Golden flower (tetraploid) 11.443
CNS0095614Golden flower (tetraploid) 22.081
CNS0095615Golden flower (tetraploid) 31.299
CRA001975CRR073297Stem 18.712
CRR073298Stem 28.782
CRR073299Stem 36.411
CRR073300Leaf 18.974
CRR073301Leaf 28.552
CRR073302Leaf 36.650
CRR073303Juvenile bud 16.909
CRR073304Juvenile bud 24.246
CRR073305Juvenile bud 37.781
CRR073306Third green 11.389
CRR073307Third green 20.470
CRR073308Third green 31.164
CRR073309Second white 12.134
CRR073310Second white 22.335
CRR073311Second white 32.135
CRR073312Silver flowering 11.451
CRR073313Silver flowering 21.358
CRR073314Silver flowering 31.646
CRR073315Gold flowering 11.636
CRR073316Gold flowering 25.991
CRR073317Gold flowering 32.628
CRR073318Tawny withering 15.087
CRR073319Tawny withering 25.228
CRR073320Tawny withering 35.547