Detail information of GWHGAAZE021356


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008380513.12.08959E-49PREDICTED: methyltransferase-like protein 13 isoform X2 [Malus domestica]
trEMBLtr|M5XAN4|M5XAN4_PRUPE5E-49Uncharacterized protein {ECO:0000313|EMBL:EMJ23162.1}
TAIR10AT2G31740.19E-24S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene4949065949497482-
GWHAAZE00000006mRNA4949065949497482-
GWHAAZE00000006exon4949743149497482-
GWHAAZE00000006exon4949603549496129-
GWHAAZE00000006exon4949467649494749-
GWHAAZE00000006exon4949448849494572-
GWHAAZE00000006exon4949266849492732-
GWHAAZE00000006exon4949220549492253-
GWHAAZE00000006exon4949065949491033-
GWHAAZE00000006CDS4949743149497482-
GWHAAZE00000006CDS4949603549496129-
GWHAAZE00000006CDS4949467649494749-
GWHAAZE00000006CDS4949448849494572-
GWHAAZE00000006CDS4949266849492732-
GWHAAZE00000006CDS4949220549492253-
GWHAAZE00000006CDS4949065949491033-
Transcript Sequence

Network for GWHGAAZE021356

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.122
SRR3591706second leaf0.322
SRR3591707mature leaf0.298
SRR3591708Shoot apex0.892
SRR3591709Stem0.855
SRR3591710White floral bud1.975
SRR3591711White flower2.486
SRR3591712Green floral bud2.765
SRR3591713Yellow flower2.124
SRP173429 SRR8316895Juvenile bud stage 11.228
SRR8316896Juvenile bud stage 14.678
SRR8316897Juvenile bud stage 0.466
SRR8316894Third green stage 5.230
SRR8316900Third green stage 12.948
SRR8316901Third green stage 14.560
SRR8316898Complete white stage 3.652
SRR8316899Complete white stage 18.055
SRR8316903Complete white stage 5.921
SRR8316902Silver flowering stage4.935
SRR8316904Silver flowering stage6.647
SRR8316905Silver flowering stage2.671
SRR8316906Gold flowering stage 9.770
SRR8316907Gold flowering stage 8.036
SRR8316908Gold flowering stage 2.260
SRP132670SRR6706286Control7.416
SRR6706287Light intensity 50%7.692
SRR6706288Light intensity 20%9.096
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.319
CNS0095593Slightly white alabastrum(diploid) 222.696
CNS0095594Slightly white alabastrum(diploid) 318.905
CNS0095595Whole white alabastrum(diploid) 213.204
CNS0095596Whole white alabastrum(diploid) 313.644
CNS0095597Whole white alabastrum(diploid) 410.467
CNS0095598Silvery flower (diploied) 116.671
CNS0095599Silvery flower (diploied) 215.947
CNS0095600Silvery flower (diploied) 33.061
CNS0095601Golden flower (diploid) 111.829
CNS0095602Golden flower (diploid) 24.935
CNS0095603Golden flower (diploid) 33.641
CNS0095604Slightly white alabastrum(tetraploid) 10.463
CNS0095605Slightly white alabastrum(tetraploid) 20.156
CNS0095606Slightly white alabastrum(tetraploid) 30.436
CNS0095607Whole white alabastrum(tetraploid) 10.372
CNS0095608Whole white alabastrum(tetraploid) 20.335
CNS0095609Whole white alabastrum(tetraploid) 30.121
CNS0095610Silvery flower (tetraploid) 10.259
CNS0095611Silvery flower (tetraploid) 20.014
CNS0095612Silvery flower (tetraploid) 30.173
CNS0095613Golden flower (tetraploid) 10.407
CNS0095614Golden flower (tetraploid) 20.139
CNS0095615Golden flower (tetraploid) 30.141
CRA001975CRR073297Stem 19.139
CRR073298Stem 27.410
CRR073299Stem 32.886
CRR073300Leaf 18.333
CRR073301Leaf 28.430
CRR073302Leaf 32.734
CRR073303Juvenile bud 12.292
CRR073304Juvenile bud 20.762
CRR073305Juvenile bud 32.852
CRR073306Third green 10.379
CRR073307Third green 20.000
CRR073308Third green 30.367
CRR073309Second white 10.049
CRR073310Second white 20.495
CRR073311Second white 30.210
CRR073312Silver flowering 10.034
CRR073313Silver flowering 20.459
CRR073314Silver flowering 30.132
CRR073315Gold flowering 12.127
CRR073316Gold flowering 23.577
CRR073317Gold flowering 30.336
CRR073318Tawny withering 13.263
CRR073319Tawny withering 24.754
CRR073320Tawny withering 33.399