Detail information of GWHGAAZE021366


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010650316.12.71455E-26PREDICTED: methyltransferase-like protein 13 [Vitis vinifera]
trEMBLtr|A5B3G7|A5B3G7_VITVI7E-26Putative uncharacterized protein {ECO:0000313|EMBL:CAN78616.1}
TAIR10AT2G31740.15E-15S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5001104850011700-
GWHAAZE00000006mRNA5001104850011700-
GWHAAZE00000006exon5001104850011180-
GWHAAZE00000006exon5001138750011451-
GWHAAZE00000006exon5001154750011594-
GWHAAZE00000006exon5001169850011700-
GWHAAZE00000006CDS5001169850011700-
GWHAAZE00000006CDS5001154750011594-
GWHAAZE00000006CDS5001138750011451-
GWHAAZE00000006CDS5001104850011180-
Transcript Sequence

Network for GWHGAAZE021366

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.243
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.524
SRR3591710White floral bud0.090
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 3.135
SRR8316896Juvenile bud stage 4.361
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 1.710
SRR8316900Third green stage 4.078
SRR8316901Third green stage 3.926
SRR8316898Complete white stage 0.671
SRR8316899Complete white stage 3.082
SRR8316903Complete white stage 1.338
SRR8316902Silver flowering stage0.978
SRR8316904Silver flowering stage1.216
SRR8316905Silver flowering stage0.654
SRR8316906Gold flowering stage 1.302
SRR8316907Gold flowering stage 1.442
SRR8316908Gold flowering stage 0.949
SRP132670SRR6706286Control1.784
SRR6706287Light intensity 50%2.157
SRR6706288Light intensity 20%1.995
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.067
CNS0095593Slightly white alabastrum(diploid) 22.354
CNS0095594Slightly white alabastrum(diploid) 31.314
CNS0095595Whole white alabastrum(diploid) 21.116
CNS0095596Whole white alabastrum(diploid) 32.385
CNS0095597Whole white alabastrum(diploid) 42.403
CNS0095598Silvery flower (diploied) 13.413
CNS0095599Silvery flower (diploied) 24.027
CNS0095600Silvery flower (diploied) 32.147
CNS0095601Golden flower (diploid) 11.675
CNS0095602Golden flower (diploid) 21.913
CNS0095603Golden flower (diploid) 32.085
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.335
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.131
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 12.593
CRR073298Stem 21.697
CRR073299Stem 31.194
CRR073300Leaf 12.133
CRR073301Leaf 22.568
CRR073302Leaf 30.177
CRR073303Juvenile bud 10.362
CRR073304Juvenile bud 20.188
CRR073305Juvenile bud 30.888
CRR073306Third green 10.132
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.164
CRR073312Silver flowering 10.190
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.591
CRR073316Gold flowering 20.157
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.415
CRR073319Tawny withering 21.626
CRR073320Tawny withering 31.483