Detail information of GWHGAAZE021374


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010650316.11.9223E-167PREDICTED: methyltransferase-like protein 13 [Vitis vinifera]
trEMBLtr|W9QL05|W9QL05_9ROSA5E-160Methyltransferase-like protein 13 {ECO:0000313|EMBL:EXB23144.1}
TAIR10AT2G31740.12E-107S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5070030950708050-
GWHAAZE00000006mRNA5070030950708050-
GWHAAZE00000006exon5070804250708050-
GWHAAZE00000006exon5070716450707395-
GWHAAZE00000006exon5070581150705905-
GWHAAZE00000006exon5070561150705677-
GWHAAZE00000006exon5070517450705355-
GWHAAZE00000006exon5070427150704522-
GWHAAZE00000006exon5070266950702752-
GWHAAZE00000006exon5070251850702565-
GWHAAZE00000006exon5070235450702418-
GWHAAZE00000006exon5070189150701939-
GWHAAZE00000006exon5070030950700683-
GWHAAZE00000006CDS5070804250708050-
GWHAAZE00000006CDS5070716450707395-
GWHAAZE00000006CDS5070581150705905-
GWHAAZE00000006CDS5070561150705677-
GWHAAZE00000006CDS5070517450705355-
GWHAAZE00000006CDS5070427150704522-
GWHAAZE00000006CDS5070266950702752-
GWHAAZE00000006CDS5070251850702565-
GWHAAZE00000006CDS5070235450702418-
GWHAAZE00000006CDS5070189150701939-
GWHAAZE00000006CDS5070030950700683-
Transcript Sequence

Network for GWHGAAZE021374

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.065
SRR3591706second leaf0.017
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.128
SRR3591709Stem0.067
SRR3591710White floral bud0.224
SRR3591711White flower0.164
SRR3591712Green floral bud0.114
SRR3591713Yellow flower0.076
SRP173429 SRR8316895Juvenile bud stage 3.655
SRR8316896Juvenile bud stage 5.191
SRR8316897Juvenile bud stage 0.427
SRR8316894Third green stage 2.248
SRR8316900Third green stage 5.860
SRR8316901Third green stage 5.051
SRR8316898Complete white stage 1.674
SRR8316899Complete white stage 5.611
SRR8316903Complete white stage 3.866
SRR8316902Silver flowering stage2.713
SRR8316904Silver flowering stage2.913
SRR8316905Silver flowering stage1.092
SRR8316906Gold flowering stage 4.777
SRR8316907Gold flowering stage 3.751
SRR8316908Gold flowering stage 1.796
SRP132670SRR6706286Control3.998
SRR6706287Light intensity 50%4.678
SRR6706288Light intensity 20%5.190
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.204
CNS0095593Slightly white alabastrum(diploid) 24.089
CNS0095594Slightly white alabastrum(diploid) 33.724
CNS0095595Whole white alabastrum(diploid) 23.485
CNS0095596Whole white alabastrum(diploid) 32.626
CNS0095597Whole white alabastrum(diploid) 42.251
CNS0095598Silvery flower (diploied) 15.244
CNS0095599Silvery flower (diploied) 23.966
CNS0095600Silvery flower (diploied) 33.000
CNS0095601Golden flower (diploid) 14.675
CNS0095602Golden flower (diploid) 23.509
CNS0095603Golden flower (diploid) 32.749
CNS0095604Slightly white alabastrum(tetraploid) 10.498
CNS0095605Slightly white alabastrum(tetraploid) 20.152
CNS0095606Slightly white alabastrum(tetraploid) 30.547
CNS0095607Whole white alabastrum(tetraploid) 10.311
CNS0095608Whole white alabastrum(tetraploid) 20.160
CNS0095609Whole white alabastrum(tetraploid) 30.580
CNS0095610Silvery flower (tetraploid) 10.051
CNS0095611Silvery flower (tetraploid) 20.386
CNS0095612Silvery flower (tetraploid) 30.198
CNS0095613Golden flower (tetraploid) 10.119
CNS0095614Golden flower (tetraploid) 20.408
CNS0095615Golden flower (tetraploid) 30.142
CRA001975CRR073297Stem 13.793
CRR073298Stem 23.760
CRR073299Stem 31.442
CRR073300Leaf 15.424
CRR073301Leaf 24.102
CRR073302Leaf 30.869
CRR073303Juvenile bud 11.716
CRR073304Juvenile bud 20.482
CRR073305Juvenile bud 30.995
CRR073306Third green 10.475
CRR073307Third green 20.268
CRR073308Third green 30.560
CRR073309Second white 10.282
CRR073310Second white 20.317
CRR073311Second white 30.495
CRR073312Silver flowering 10.352
CRR073313Silver flowering 21.113
CRR073314Silver flowering 30.793
CRR073315Gold flowering 10.746
CRR073316Gold flowering 22.477
CRR073317Gold flowering 30.211
CRR073318Tawny withering 11.760
CRR073319Tawny withering 21.831
CRR073320Tawny withering 31.735