Detail information of GWHGAAZE021380


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI17265.37.4693E-107unnamed protein product [Vitis vinifera]
trEMBLtr|F6GWD0|F6GWD0_VITVI2E-109Putative uncharacterized protein {ECO:0000313|EMBL:CCB44293.1}
TAIR10AT2G31740.13E-71S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5084209450856677-
GWHAAZE00000006mRNA5084209450856677-
GWHAAZE00000006exon5085661750856677-
GWHAAZE00000006exon5085508950855417-
GWHAAZE00000006exon5084698050847183-
GWHAAZE00000006exon5084609350846350-
GWHAAZE00000006exon5084209450842468-
GWHAAZE00000006CDS5085661750856677-
GWHAAZE00000006CDS5085508950855417-
GWHAAZE00000006CDS5084698050847183-
GWHAAZE00000006CDS5084609350846350-
GWHAAZE00000006CDS5084209450842468-
Transcript Sequence

Network for GWHGAAZE021380

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040
CFinderModule0130


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.856
SRR3591706second leaf0.292
SRR3591707mature leaf0.490
SRR3591708Shoot apex0.893
SRR3591709Stem0.401
SRR3591710White floral bud0.324
SRR3591711White flower0.260
SRR3591712Green floral bud0.439
SRR3591713Yellow flower0.297
SRP173429 SRR8316895Juvenile bud stage 8.486
SRR8316896Juvenile bud stage 14.023
SRR8316897Juvenile bud stage 0.200
SRR8316894Third green stage 4.820
SRR8316900Third green stage 8.104
SRR8316901Third green stage 9.589
SRR8316898Complete white stage 2.493
SRR8316899Complete white stage 10.446
SRR8316903Complete white stage 6.638
SRR8316902Silver flowering stage5.829
SRR8316904Silver flowering stage7.795
SRR8316905Silver flowering stage4.627
SRR8316906Gold flowering stage 19.424
SRR8316907Gold flowering stage 16.140
SRR8316908Gold flowering stage 4.729
SRP132670SRR6706286Control8.283
SRR6706287Light intensity 50%9.881
SRR6706288Light intensity 20%9.202
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.807
CNS0095593Slightly white alabastrum(diploid) 28.641
CNS0095594Slightly white alabastrum(diploid) 38.225
CNS0095595Whole white alabastrum(diploid) 28.623
CNS0095596Whole white alabastrum(diploid) 35.063
CNS0095597Whole white alabastrum(diploid) 46.074
CNS0095598Silvery flower (diploied) 114.333
CNS0095599Silvery flower (diploied) 27.814
CNS0095600Silvery flower (diploied) 36.797
CNS0095601Golden flower (diploid) 111.518
CNS0095602Golden flower (diploid) 29.153
CNS0095603Golden flower (diploid) 39.618
CNS0095604Slightly white alabastrum(tetraploid) 10.034
CNS0095605Slightly white alabastrum(tetraploid) 20.138
CNS0095606Slightly white alabastrum(tetraploid) 30.098
CNS0095607Whole white alabastrum(tetraploid) 10.106
CNS0095608Whole white alabastrum(tetraploid) 20.149
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.081
CNS0095611Silvery flower (tetraploid) 20.115
CNS0095612Silvery flower (tetraploid) 30.062
CNS0095613Golden flower (tetraploid) 10.041
CNS0095614Golden flower (tetraploid) 20.087
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 19.284
CRR073298Stem 26.220
CRR073299Stem 30.569
CRR073300Leaf 18.844
CRR073301Leaf 26.391
CRR073302Leaf 30.621
CRR073303Juvenile bud 11.268
CRR073304Juvenile bud 20.169
CRR073305Juvenile bud 30.508
CRR073306Third green 10.020
CRR073307Third green 20.020
CRR073308Third green 30.041
CRR073309Second white 10.505
CRR073310Second white 20.196
CRR073311Second white 30.359
CRR073312Silver flowering 10.033
CRR073313Silver flowering 20.005
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.765
CRR073316Gold flowering 21.347
CRR073317Gold flowering 30.474
CRR073318Tawny withering 11.992
CRR073319Tawny withering 21.283
CRR073320Tawny withering 31.004