Gene detail

Detail information of GWHGAAZE021404

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CBI17221.3	3.3018E-166	unnamed protein product [Vitis vinifera]
trEMBL	tr\|A0A022RTB2\|A0A022RTB2_ERYGU	1E-144	Uncharacterized protein {ECO:0000313\|EMBL:EYU42938.1}
TAIR10	AT4G13750.1	1E-71	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	51743161	51745740	+
GWHAAZE00000006	mRNA	51743161	51745740	+
GWHAAZE00000006	exon	51743161	51743533	+
GWHAAZE00000006	exon	51743994	51744250	+
GWHAAZE00000006	exon	51744694	51745201	+
GWHAAZE00000006	exon	51745394	51745740	+
GWHAAZE00000006	CDS	51743161	51743533	+
GWHAAZE00000006	CDS	51743994	51744250	+
GWHAAZE00000006	CDS	51744694	51745201	+
GWHAAZE00000006	CDS	51745394	51745740	+

Transcript Sequence
>GWHTAAZE021428 ATGAAAACATATATACATATTTTGTTTGATGTCTCAAAGGTGTTCCAAGTTTTTGTGAAGTGGAACGATGGATATATATCTGGATTACTGAATTCTGAAGACATTGAGTACTTCAAAGAGAATCTTGTGAAAGAGGAATTTACAGTGCTTCCCACTGCAATGGATAAATGGGTTTCTCTACACCCTTCATTTGGCCATGTATGCTGGTGTGATGATGACAAGTTAAGAAAGGAATTTCAGAGTTTCAACAATATTGATTTTCTTTACTTTGGAGAACTTAGCGACAATGAAGAACAGATGGAAACAGTTTCTGCCCTTGTCCGAATATTAGGAATTCCTGCTCTTTCAGAGGTAAGCTCCCTCCTTCCCTTTTGTGACAACTTCGAAGCGATATATTATGGGCCAGCAGACTCGAGTTTCAAAACATCATTGGTGAACTGGGCACTTCCTTATGCTCAGCCCACGTCCTATAATGCGTATCCTGATAAATATTCTCAACTCAAGCAATCTGGATTTGAAATCCTGAATCGTCTGCGAATTATTGTCGTTGAAAAGTTGTTCTTAAGGTATGTTATAAAGAGGGCCGACATTAAATCTAAGAAGCGATGTGAATGTAGCTGTCTTTTACAGGACAACATTTTGTACATCACTACAGAATCAGATTCTCACTCGATATTCATGGAGCTTTCTCGTATGCTGCTCGATGGAAATACTGAACTTCACTTGGCCAATTTTCTTCACATGATCACAACCATGGCAGAATCGGGCTCCACCGAGGAACAGACTGAAATCTTCATTTTGAATAGCCAAAAGATACCCAAGCTACCCGATGAAGAATCAATCTGGGCCATTCAATCTTTGCCACCATCATCTGAGAACGAACAGACAGTAATAGCAAGCTCTGCTTGGGCAATGATGAATGAAAACCCTCCAATATCCAAGAGAAAACTGGAACCAACTCCAGCTGGCCACCTGCCGATTGGAGAACTGCCCTGGTTTCAATTATTCTCTTGCAAACAGGTTTTCACCCAATCCTCCAGTGGTGGCACACCAACTCTTAAGGGTGATAAAGACGAAGAAACTACTGAAGAAACGCCAGATTGGACGTTAGAAGAAGTTCCCCACAATTATCCCAAGGAGAAGGGGTTTGTAGCTTTCAAATACTTTGTTGGGAAATTTGGAGACCCAACTGTGAAATGGGTGAATGAAGCTAAAGAAACAGGGCTACCCTACGATATTGTGGTAGGGGACAATGAGAACAACAGAGAGTACATCGAAGTTAAAGCTACTAAATCTGCAGAAAAGGATTGGTTCGATATAACGGTTCGTGAGTGGCAATTCGCAGTTGAAAAGGGCAAATCTTTTAGCATCGCTCGGGTTGTTCTGCTGGATAATAACAAGGGTCAGATCACAATATACAAAAATCTGGTAAGTCTATGCCACTTGGGGCAACTGCAGTTGGCTCTTGTGATGCCGAGACAGTAG

Network for GWHGAAZE021404

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0063

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13020.7	DUF3883	385	469	3.90E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.294
	SRR3591706	second leaf	0.224
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.411
	SRR3591709	Stem	0.608
	SRR3591710	White floral bud	0.988
	SRR3591711	White flower	3.333
	SRR3591712	Green floral bud	0.561
	SRR3591713	Yellow flower	1.268
SRP173429	SRR8316895	Juvenile bud stage	0.456
	SRR8316896	Juvenile bud stage	0.204
	SRR8316897	Juvenile bud stage	0.088
	SRR8316894	Third green stage	0.276
	SRR8316900	Third green stage	0.361
	SRR8316901	Third green stage	0.203
	SRR8316898	Complete white stage	0.145
	SRR8316899	Complete white stage	0.287
	SRR8316903	Complete white stage	0.257
	SRR8316902	Silver flowering stage	0.168
	SRR8316904	Silver flowering stage	0.297
	SRR8316905	Silver flowering stage	0.131
	SRR8316906	Gold flowering stage	0.424
	SRR8316907	Gold flowering stage	0.148
	SRR8316908	Gold flowering stage	0.095
SRP132670	SRR6706286	Control	0.184
	SRR6706287	Light intensity 50%	0.111
	SRR6706288	Light intensity 20%	0.162
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.428
	CNS0095593	Slightly white alabastrum(diploid) 2	0.454
	CNS0095594	Slightly white alabastrum(diploid) 3	0.573
	CNS0095595	Whole white alabastrum(diploid) 2	0.278
	CNS0095596	Whole white alabastrum(diploid) 3	0.256
	CNS0095597	Whole white alabastrum(diploid) 4	0.298
	CNS0095598	Silvery flower (diploied) 1	0.136
	CNS0095599	Silvery flower (diploied) 2	0.273
	CNS0095600	Silvery flower (diploied) 3	0.713
	CNS0095601	Golden flower (diploid) 1	0.561
	CNS0095602	Golden flower (diploid) 2	0.202
	CNS0095603	Golden flower (diploid) 3	0.092
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.401
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.933
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.561
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.478
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.304
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.320
	CNS0095610	Silvery flower (tetraploid) 1	0.959
	CNS0095611	Silvery flower (tetraploid) 2	0.963
	CNS0095612	Silvery flower (tetraploid) 3	0.545
	CNS0095613	Golden flower (tetraploid) 1	0.578
	CNS0095614	Golden flower (tetraploid) 2	0.556
	CNS0095615	Golden flower (tetraploid) 3	0.039
CRA001975	CRR073297	Stem 1	0.458
	CRR073298	Stem 2	0.233
	CRR073299	Stem 3	0.166
	CRR073300	Leaf 1	0.452
	CRR073301	Leaf 2	0.349
	CRR073302	Leaf 3	0.063
	CRR073303	Juvenile bud 1	0.011
	CRR073304	Juvenile bud 2	0.088
	CRR073305	Juvenile bud 3	0.087
	CRR073306	Third green 1	0.069
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.010
	CRR073309	Second white 1	0.038
	CRR073310	Second white 2	0.009
	CRR073311	Second white 3	0.219
	CRR073312	Silver flowering 1	0.087
	CRR073313	Silver flowering 2	0.047
	CRR073314	Silver flowering 3	0.017
	CRR073315	Gold flowering 1	0.297
	CRR073316	Gold flowering 2	0.086
	CRR073317	Gold flowering 3	0.038
	CRR073318	Tawny withering 1	0.191
	CRR073319	Tawny withering 2	0.017
	CRR073320	Tawny withering 3	0.323