Gene detail

Detail information of GWHGAAZE021499

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010664626.1	0	PREDICTED: cytochrome P450 CYP82D47 [Vitis vinifera]
COG	YP_004303682.1	3E-31	cytochrome P450
Swissprot	tr\|O49858\|C82A3_SOYBN	0	Cytochrome P450 82A3
trEMBL	tr\|F6H023\|F6H023_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB45900.1}
TAIR10	AT4G31940.1	6E-132	cytochrome P450, family 82, subfamily C, polypeptide 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	55150907	55152829	+
GWHAAZE00000006	mRNA	55150907	55152829	+
GWHAAZE00000006	exon	55150907	55151830	+
GWHAAZE00000006	exon	55152206	55152829	+
GWHAAZE00000006	CDS	55150907	55151830	+
GWHAAZE00000006	CDS	55152206	55152829	+

Transcript Sequence
>GWHTAAZE021523 ATGGAGATGCTTCTCTCATTGACAATAGCCTCCATTTTCCTACTCTCCCTTTACTATGTGTTGTGGGGATTAAAAATAGCAAAGAAAAACAAAGCACCACCACAAGTGGGCGGTGCATGGCCTATAATAGGCCACCTCCATCTTCTCGGCGGCCCTCAAGTGCCCCACAAAACACTAGCCTCGATGGCGGACAAGCACGGCCCAATCTTCACATTCAAGCTCGGCATACACCAAGTCTTGGTAGTGAGTGACTCAAACCTAGCCAAAGAGTGCTTGACCACAAATGATAAAGCATTTGCAAATCGGCCCAAGTCAGTCGCGGTGGAGCTCATGGGCTACAACTACGCCATGTTTGGGCTAGGTCCTTATGGGCCATACTGGCGCCAAGTACGAAAGACAGTTGTAAATGACCTCCTCTCCAAGCGCCAGATATCACTGGTAGAACACGTTCGAGTCTCAGAAGTGAGAGAAACAATGCAAGAGACCTACAAGTCTTGCCTAAGTAACAAAAGTGGTTCAAACAAAGCAAAAGCCGAGATGAAGGACTGGTTTGGGAGGATTGTGCTAAATACGGTGGTGAGGATGATAACAGGGAAGCGGTATTCGAGTGAAGGTGAACAAGGTTTGAAGGACTATCAAAAGGTATTGAATGATTTTAATGTGTTGCTTGGGATATTTGTTGTGGCTGATGCAATTCCATGGCTAAGGTGGTTGGATTTTGGAGGGCATGAGAAGGCAATGAAGGAGACTTTCATGGAGATTGATTGTATATTACAAGTGTGGTTAGAGGAGCACAAGAGAAAGAGGACAATAGATAATGAAGAAAAGGACTTCATGGATGTGATGTTGTCAACTCTTGAGGGTGTTTCTCATCAAGAACTTGGTGGTTTTGATGTTGATATAGTTGCCAAATCGACATGCTTGTCAATGCTAGCCGGAGCCGTCGATACTACAATAGTGACGCTGACATGGGCTCTCTCTTTACTACTCAACAACAAGAATACGTTGAAAATGGTACAAGAAGAACTTGACCTACATGTCGGAAAAGAAAGACAAGTGGAGGAGTCAGATATAAAAAACTTGGTTTATCTCCAAGCTGTCTTCAAAGAAACGCTGCGACTATATCCGGCTGCTCCACTCTTGTTGCCACATGAATCCAGGGAAGACTGCATAGTGGGGGGCTACCACATTCCCAAAGGCACTCGCTTGTTAATCAACGTTTGGAAGATCCATCGGGACCCAAGCATATGGTCGGATCCGAGTGAGTTTCACCCAGATAGATTCTTGACCAGCCACAAAGAAGTCAACTTCAGAGGCCAACATTTTGAATTAATTCCATTTAGTAGTGGTAGAAGAATTTGCCCTGGTATTTCTCTAGCTATGCAAGATATGCAGTTGATATTGGCTACCTTACTACACGGGTTTGAGGTCGCAACGGTCTCAGATGAACCAATTGATATGAGCGAGAGCTTTGGATTAACGAACCTCAAAAACACTCCACTTGAAGTCTTTCTTAAGCCGCGCTTGTCTCCCAACCTCTATGAATAG

Network for GWHGAAZE021499

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	34	494	5.80E-101

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	151.526
	SRR3591706	second leaf	25.456
	SRR3591707	mature leaf	39.552
	SRR3591708	Shoot apex	54.873
	SRR3591709	Stem	252.932
	SRR3591710	White floral bud	72.397
	SRR3591711	White flower	42.154
	SRR3591712	Green floral bud	63.861
	SRR3591713	Yellow flower	28.811
SRP173429	SRR8316895	Juvenile bud stage	16.933
	SRR8316896	Juvenile bud stage	25.171
	SRR8316897	Juvenile bud stage	12.833
	SRR8316894	Third green stage	14.137
	SRR8316900	Third green stage	46.615
	SRR8316901	Third green stage	42.081
	SRR8316898	Complete white stage	27.748
	SRR8316899	Complete white stage	83.965
	SRR8316903	Complete white stage	36.182
	SRR8316902	Silver flowering stage	16.003
	SRR8316904	Silver flowering stage	26.389
	SRR8316905	Silver flowering stage	11.444
	SRR8316906	Gold flowering stage	33.099
	SRR8316907	Gold flowering stage	28.605
	SRR8316908	Gold flowering stage	35.070
SRP132670	SRR6706286	Control	49.793
	SRR6706287	Light intensity 50%	50.237
	SRR6706288	Light intensity 20%	47.750
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	22.198
	CNS0095593	Slightly white alabastrum(diploid) 2	34.085
	CNS0095594	Slightly white alabastrum(diploid) 3	20.929
	CNS0095595	Whole white alabastrum(diploid) 2	27.062
	CNS0095596	Whole white alabastrum(diploid) 3	25.503
	CNS0095597	Whole white alabastrum(diploid) 4	24.416
	CNS0095598	Silvery flower (diploied) 1	36.651
	CNS0095599	Silvery flower (diploied) 2	29.838
	CNS0095600	Silvery flower (diploied) 3	59.128
	CNS0095601	Golden flower (diploid) 1	36.526
	CNS0095602	Golden flower (diploid) 2	58.493
	CNS0095603	Golden flower (diploid) 3	55.824
	CNS0095604	Slightly white alabastrum(tetraploid) 1	37.408
	CNS0095605	Slightly white alabastrum(tetraploid) 2	29.335
	CNS0095606	Slightly white alabastrum(tetraploid) 3	75.413
	CNS0095607	Whole white alabastrum(tetraploid) 1	31.821
	CNS0095608	Whole white alabastrum(tetraploid) 2	26.035
	CNS0095609	Whole white alabastrum(tetraploid) 3	41.861
	CNS0095610	Silvery flower (tetraploid) 1	66.881
	CNS0095611	Silvery flower (tetraploid) 2	78.387
	CNS0095612	Silvery flower (tetraploid) 3	77.522
	CNS0095613	Golden flower (tetraploid) 1	56.052
	CNS0095614	Golden flower (tetraploid) 2	69.143
	CNS0095615	Golden flower (tetraploid) 3	64.821
CRA001975	CRR073297	Stem 1	36.248
	CRR073298	Stem 2	38.337
	CRR073299	Stem 3	29.517
	CRR073300	Leaf 1	56.528
	CRR073301	Leaf 2	50.077
	CRR073302	Leaf 3	37.456
	CRR073303	Juvenile bud 1	57.855
	CRR073304	Juvenile bud 2	43.159
	CRR073305	Juvenile bud 3	68.688
	CRR073306	Third green 1	19.536
	CRR073307	Third green 2	21.138
	CRR073308	Third green 3	21.432
	CRR073309	Second white 1	19.212
	CRR073310	Second white 2	17.758
	CRR073311	Second white 3	19.683
	CRR073312	Silver flowering 1	24.022
	CRR073313	Silver flowering 2	29.641
	CRR073314	Silver flowering 3	24.137
	CRR073315	Gold flowering 1	19.434
	CRR073316	Gold flowering 2	21.877
	CRR073317	Gold flowering 3	24.083
	CRR073318	Tawny withering 1	62.418
	CRR073319	Tawny withering 2	44.176
	CRR073320	Tawny withering 3	56.075