Detail information of GWHGAAZE021503


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002518089.13.84708E-54hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
Swissprottr|Q9FZ86|PDCB3_ARATH4E-32PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (Precursor)
trEMBLtr|B9RWH0|B9RWH0_RICCO1E-54Hydrolase, hydrolyzing O-glycosyl compounds, putative {ECO:0000313|EMBL:EEF44222.1}
TAIR10AT4G13600.13E-38Carbohydrate-binding X8 domain superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5522945255230161-
GWHAAZE00000006mRNA5522945255230161-
GWHAAZE00000006exon5522984055230161-
GWHAAZE00000006exon5522945255229567-
GWHAAZE00000006CDS5522984055230161-
GWHAAZE00000006CDS5522945255229567-
Transcript Sequence

Network for GWHGAAZE021503

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07983.14X8311011.10E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.300
SRR3591706second leaf3.280
SRR3591707mature leaf0.378
SRR3591708Shoot apex15.788
SRR3591709Stem8.326
SRR3591710White floral bud3.563
SRR3591711White flower0.733
SRR3591712Green floral bud2.541
SRR3591713Yellow flower0.609
SRP173429 SRR8316895Juvenile bud stage 3.048
SRR8316896Juvenile bud stage 1.436
SRR8316897Juvenile bud stage 2.032
SRR8316894Third green stage 0.627
SRR8316900Third green stage 0.159
SRR8316901Third green stage 0.966
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.862
SRR8316903Complete white stage 0.185
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.077
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.168
SRP132670SRR6706286Control0.902
SRR6706287Light intensity 50%0.462
SRR6706288Light intensity 20%0.344
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.671
CNS0095593Slightly white alabastrum(diploid) 25.781
CNS0095594Slightly white alabastrum(diploid) 31.883
CNS0095595Whole white alabastrum(diploid) 20.963
CNS0095596Whole white alabastrum(diploid) 30.361
CNS0095597Whole white alabastrum(diploid) 40.412
CNS0095598Silvery flower (diploied) 10.066
CNS0095599Silvery flower (diploied) 20.645
CNS0095600Silvery flower (diploied) 30.052
CNS0095601Golden flower (diploid) 11.785
CNS0095602Golden flower (diploid) 20.389
CNS0095603Golden flower (diploid) 30.223
CNS0095604Slightly white alabastrum(tetraploid) 15.733
CNS0095605Slightly white alabastrum(tetraploid) 24.267
CNS0095606Slightly white alabastrum(tetraploid) 37.286
CNS0095607Whole white alabastrum(tetraploid) 10.902
CNS0095608Whole white alabastrum(tetraploid) 20.102
CNS0095609Whole white alabastrum(tetraploid) 30.789
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.621
CNS0095612Silvery flower (tetraploid) 30.731
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.247
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 14.838
CRR073298Stem 25.159
CRR073299Stem 36.583
CRR073300Leaf 11.866
CRR073301Leaf 21.668
CRR073302Leaf 30.801
CRR073303Juvenile bud 11.196
CRR073304Juvenile bud 20.114
CRR073305Juvenile bud 31.414
CRR073306Third green 10.913
CRR073307Third green 21.953
CRR073308Third green 30.864
CRR073309Second white 10.000
CRR073310Second white 20.176
CRR073311Second white 30.122
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.980
CRR073316Gold flowering 20.868
CRR073317Gold flowering 31.239
CRR073318Tawny withering 111.332
CRR073319Tawny withering 26.579
CRR073320Tawny withering 316.339