Detail information of GWHGAAZE021508


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002535506.11.1331E-129aldo/keto reductase, putative [Ricinus communis]
COGYP_007144556.11E-87pyridoxine 4-dehydrogenase
Swissprottr|P49249|IN22_MAIZE9E-129IN2-2 protein
trEMBLtr|B9TB87|B9TB87_RICCO4E-130Aldo/keto reductase, putative {ECO:0000313|EMBL:EEF26877.1}
TAIR10AT1G60710.15E-101NAD(P)-linked oxidoreductase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5539836455401323-
GWHAAZE00000006mRNA5539836455401323-
GWHAAZE00000006exon5539836455398484-
GWHAAZE00000006exon5539884055399012-
GWHAAZE00000006exon5539951655399719-
GWHAAZE00000006exon5540111155401323-
GWHAAZE00000006CDS5540111155401323-
GWHAAZE00000006CDS5539951655399719-
GWHAAZE00000006CDS5539884055399012-
GWHAAZE00000006CDS5539836455398484-
Transcript Sequence

Network for GWHGAAZE021508

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0314


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00248.22Aldo_ket_red232283.60E-56
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.231
SRR3591706second leaf0.102
SRR3591707mature leaf0.126
SRR3591708Shoot apex1.449
SRR3591709Stem0.625
SRR3591710White floral bud16.244
SRR3591711White flower6.761
SRR3591712Green floral bud20.037
SRR3591713Yellow flower4.811
SRP173429 SRR8316895Juvenile bud stage 13.633
SRR8316896Juvenile bud stage 19.570
SRR8316897Juvenile bud stage 5.940
SRR8316894Third green stage 3.486
SRR8316900Third green stage 1.954
SRR8316901Third green stage 2.924
SRR8316898Complete white stage 2.242
SRR8316899Complete white stage 3.062
SRR8316903Complete white stage 2.151
SRR8316902Silver flowering stage1.050
SRR8316904Silver flowering stage1.678
SRR8316905Silver flowering stage0.690
SRR8316906Gold flowering stage 1.884
SRR8316907Gold flowering stage 3.199
SRR8316908Gold flowering stage 2.896
SRP132670SRR6706286Control287.315
SRR6706287Light intensity 50%67.415
SRR6706288Light intensity 20%18.873
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.016
CNS0095593Slightly white alabastrum(diploid) 22.571
CNS0095594Slightly white alabastrum(diploid) 32.035
CNS0095595Whole white alabastrum(diploid) 20.900
CNS0095596Whole white alabastrum(diploid) 30.356
CNS0095597Whole white alabastrum(diploid) 40.239
CNS0095598Silvery flower (diploied) 15.782
CNS0095599Silvery flower (diploied) 23.053
CNS0095600Silvery flower (diploied) 33.988
CNS0095601Golden flower (diploid) 11.571
CNS0095602Golden flower (diploid) 24.223
CNS0095603Golden flower (diploid) 33.432
CNS0095604Slightly white alabastrum(tetraploid) 122.438
CNS0095605Slightly white alabastrum(tetraploid) 221.162
CNS0095606Slightly white alabastrum(tetraploid) 376.200
CNS0095607Whole white alabastrum(tetraploid) 110.840
CNS0095608Whole white alabastrum(tetraploid) 25.008
CNS0095609Whole white alabastrum(tetraploid) 36.209
CNS0095610Silvery flower (tetraploid) 124.202
CNS0095611Silvery flower (tetraploid) 214.113
CNS0095612Silvery flower (tetraploid) 35.725
CNS0095613Golden flower (tetraploid) 16.377
CNS0095614Golden flower (tetraploid) 28.528
CNS0095615Golden flower (tetraploid) 31.329
CRA001975CRR073297Stem 13.890
CRR073298Stem 22.365
CRR073299Stem 32.235
CRR073300Leaf 10.675
CRR073301Leaf 21.417
CRR073302Leaf 30.080
CRR073303Juvenile bud 10.076
CRR073304Juvenile bud 20.966
CRR073305Juvenile bud 35.064
CRR073306Third green 12.558
CRR073307Third green 22.457
CRR073308Third green 36.591
CRR073309Second white 10.227
CRR073310Second white 21.182
CRR073311Second white 30.141
CRR073312Silver flowering 10.502
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.090
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 31.518
CRR073318Tawny withering 10.595
CRR073319Tawny withering 22.508
CRR073320Tawny withering 30.000