Detail information of GWHGAAZE021534


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002285674.10PREDICTED: non-lysosomal glucosylceramidase [Vitis vinifera]
COGYP_001543081.12E-91hypothetical protein Haur_0301
trEMBLtr|A0A061EJX3|A0A061EJX3_THECC0Non-lysosomal glucosylceramidase {ECO:0000256|PIRNR:PIRNR028944}
TAIR10AT3G24180.20Beta-glucosidase, GBA2 type family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5620276356215987-
GWHAAZE00000006mRNA5620276356215987-
GWHAAZE00000006exon5621590756215987-
GWHAAZE00000006exon5621466056214770-
GWHAAZE00000006exon5621448156214537-
GWHAAZE00000006exon5621421356214289-
GWHAAZE00000006exon5621401856214117-
GWHAAZE00000006exon5621325256213325-
GWHAAZE00000006exon5621265956212780-
GWHAAZE00000006exon5621249756212600-
GWHAAZE00000006exon5621058956210642-
GWHAAZE00000006exon5620996556210020-
GWHAAZE00000006exon5620977756209854-
GWHAAZE00000006exon5620826356208404-
GWHAAZE00000006exon5620756256207746-
GWHAAZE00000006exon5620694956207016-
GWHAAZE00000006exon5620665356206749-
GWHAAZE00000006exon5620610556206166-
GWHAAZE00000006exon5620397156205246-
GWHAAZE00000006exon5620276356203024-
GWHAAZE00000006CDS5621590756215987-
GWHAAZE00000006CDS5621466056214770-
GWHAAZE00000006CDS5621448156214537-
GWHAAZE00000006CDS5621421356214289-
GWHAAZE00000006CDS5621401856214117-
GWHAAZE00000006CDS5621325256213325-
GWHAAZE00000006CDS5621265956212780-
GWHAAZE00000006CDS5621249756212600-
GWHAAZE00000006CDS5621058956210642-
GWHAAZE00000006CDS5620996556210020-
GWHAAZE00000006CDS5620977756209854-
GWHAAZE00000006CDS5620826356208404-
GWHAAZE00000006CDS5620756256207746-
GWHAAZE00000006CDS5620694956207016-
GWHAAZE00000006CDS5620665356206749-
GWHAAZE00000006CDS5620610556206166-
GWHAAZE00000006CDS5620397156205246-
GWHAAZE00000006CDS5620276356203024-
Transcript Sequence

Network for GWHGAAZE021534

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12215.9Glyco_hydr_116N1024361.50E-101
PF04685.14DUF6085839449.60E-159
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17108GBA2 Metabolic pathways map01100
Sphingolipid metabolismmap00600
Other glycan degradationmap00511

Gene Ontology

GO term OntologyName
GO:0006680biological_processglucosylceramide catabolic process
GO:0016020cellular_componentmembrane
GO:0003824molecular_functioncatalytic activity
GO:0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004348molecular_functionglucosylceramidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf25.158
SRR3591706second leaf7.872
SRR3591707mature leaf10.014
SRR3591708Shoot apex10.693
SRR3591709Stem35.598
SRR3591710White floral bud33.035
SRR3591711White flower35.696
SRR3591712Green floral bud20.130
SRR3591713Yellow flower28.557
SRP173429 SRR8316895Juvenile bud stage 9.810
SRR8316896Juvenile bud stage 14.058
SRR8316897Juvenile bud stage 6.085
SRR8316894Third green stage 6.553
SRR8316900Third green stage 18.644
SRR8316901Third green stage 18.909
SRR8316898Complete white stage 9.490
SRR8316899Complete white stage 28.209
SRR8316903Complete white stage 18.405
SRR8316902Silver flowering stage11.847
SRR8316904Silver flowering stage18.030
SRR8316905Silver flowering stage8.596
SRR8316906Gold flowering stage 30.294
SRR8316907Gold flowering stage 24.818
SRR8316908Gold flowering stage 26.474
SRP132670SRR6706286Control15.734
SRR6706287Light intensity 50%16.867
SRR6706288Light intensity 20%17.532
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.499
CNS0095593Slightly white alabastrum(diploid) 29.262
CNS0095594Slightly white alabastrum(diploid) 39.005
CNS0095595Whole white alabastrum(diploid) 26.843
CNS0095596Whole white alabastrum(diploid) 37.967
CNS0095597Whole white alabastrum(diploid) 48.366
CNS0095598Silvery flower (diploied) 112.796
CNS0095599Silvery flower (diploied) 212.100
CNS0095600Silvery flower (diploied) 331.132
CNS0095601Golden flower (diploid) 114.401
CNS0095602Golden flower (diploid) 225.832
CNS0095603Golden flower (diploid) 323.579
CNS0095604Slightly white alabastrum(tetraploid) 18.944
CNS0095605Slightly white alabastrum(tetraploid) 27.462
CNS0095606Slightly white alabastrum(tetraploid) 315.872
CNS0095607Whole white alabastrum(tetraploid) 17.573
CNS0095608Whole white alabastrum(tetraploid) 27.833
CNS0095609Whole white alabastrum(tetraploid) 315.187
CNS0095610Silvery flower (tetraploid) 124.237
CNS0095611Silvery flower (tetraploid) 225.427
CNS0095612Silvery flower (tetraploid) 323.571
CNS0095613Golden flower (tetraploid) 112.191
CNS0095614Golden flower (tetraploid) 220.157
CNS0095615Golden flower (tetraploid) 318.755
CRA001975CRR073297Stem 118.051
CRR073298Stem 215.963
CRR073299Stem 311.845
CRR073300Leaf 121.559
CRR073301Leaf 217.762
CRR073302Leaf 313.499
CRR073303Juvenile bud 114.750
CRR073304Juvenile bud 211.905
CRR073305Juvenile bud 322.333
CRR073306Third green 110.631
CRR073307Third green 28.847
CRR073308Third green 310.723
CRR073309Second white 17.581
CRR073310Second white 211.652
CRR073311Second white 313.392
CRR073312Silver flowering 111.544
CRR073313Silver flowering 29.855
CRR073314Silver flowering 39.946
CRR073315Gold flowering 14.003
CRR073316Gold flowering 28.845
CRR073317Gold flowering 35.379
CRR073318Tawny withering 123.767
CRR073319Tawny withering 217.459
CRR073320Tawny withering 320.518