Detail information of GWHGAAZE021616


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5808829658091716-
GWHAAZE00000006mRNA5808829658091716-
GWHAAZE00000006exon5809147658091716-
GWHAAZE00000006exon5808927858089672-
GWHAAZE00000006exon5808829658088613-
GWHAAZE00000006five_prime_UTR5809161858091716-
GWHAAZE00000006CDS5809147658091617-
GWHAAZE00000006CDS5808927858089672-
GWHAAZE00000006CDS5808829658088613-
Transcript Sequence

Network for GWHGAAZE021616

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0120


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.215
SRR3591706second leaf1.371
SRR3591707mature leaf1.318
SRR3591708Shoot apex0.889
SRR3591709Stem2.255
SRR3591710White floral bud1.043
SRR3591711White flower1.824
SRR3591712Green floral bud3.760
SRR3591713Yellow flower0.253
SRP173429 SRR8316895Juvenile bud stage 2.289
SRR8316896Juvenile bud stage 4.194
SRR8316897Juvenile bud stage 0.062
SRR8316894Third green stage 0.897
SRR8316900Third green stage 4.025
SRR8316901Third green stage 3.688
SRR8316898Complete white stage 0.421
SRR8316899Complete white stage 4.054
SRR8316903Complete white stage 0.279
SRR8316902Silver flowering stage0.038
SRR8316904Silver flowering stage0.281
SRR8316905Silver flowering stage0.090
SRR8316906Gold flowering stage 0.175
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.012
SRP132670SRR6706286Control2.211
SRR6706287Light intensity 50%2.907
SRR6706288Light intensity 20%3.002
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.737
CNS0095593Slightly white alabastrum(diploid) 22.954
CNS0095594Slightly white alabastrum(diploid) 36.783
CNS0095595Whole white alabastrum(diploid) 22.566
CNS0095596Whole white alabastrum(diploid) 32.137
CNS0095597Whole white alabastrum(diploid) 41.655
CNS0095598Silvery flower (diploied) 11.786
CNS0095599Silvery flower (diploied) 23.122
CNS0095600Silvery flower (diploied) 30.604
CNS0095601Golden flower (diploid) 12.425
CNS0095602Golden flower (diploid) 21.243
CNS0095603Golden flower (diploid) 31.140
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 14.897
CRR073298Stem 25.082
CRR073299Stem 32.897
CRR073300Leaf 12.828
CRR073301Leaf 23.093
CRR073302Leaf 33.877
CRR073303Juvenile bud 13.317
CRR073304Juvenile bud 21.429
CRR073305Juvenile bud 32.865
CRR073306Third green 10.110
CRR073307Third green 20.231
CRR073308Third green 30.076
CRR073309Second white 10.000
CRR073310Second white 20.132
CRR073311Second white 30.024
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 13.419
CRR073316Gold flowering 24.463
CRR073317Gold flowering 36.392
CRR073318Tawny withering 110.058
CRR073319Tawny withering 211.291
CRR073320Tawny withering 33.536