Detail information of GWHGAAZE021703


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002312522.21.78062E-55hypothetical protein POPTR_0008s15040g [Populus trichocarpa]
Swissprottr|P80728|MAVI_CUCPE2E-37Mavicyanin
trEMBLtr|A9PA63|A9PA63_POPTR7E-56Uncharacterized protein {ECO:0000313|EMBL:EEE89889.2}
TAIR10AT5G26330.12E-38Cupredoxin superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5986627359868651-
GWHAAZE00000006mRNA5986627359868651-
GWHAAZE00000006exon5986845959868651-
GWHAAZE00000006exon5986627359866637-
GWHAAZE00000006CDS5986845959868651-
GWHAAZE00000006CDS5986627359866637-
Transcript Sequence

Network for GWHGAAZE021703

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0091


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02298.18Cu_bind_like411249.50E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009055molecular_functionelectron transfer activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf55.041
SRR3591706second leaf351.404
SRR3591707mature leaf143.638
SRR3591708Shoot apex271.801
SRR3591709Stem7.162
SRR3591710White floral bud17.564
SRR3591711White flower4.518
SRR3591712Green floral bud80.656
SRR3591713Yellow flower0.238
SRP173429 SRR8316895Juvenile bud stage 96.635
SRR8316896Juvenile bud stage 104.383
SRR8316897Juvenile bud stage 59.970
SRR8316894Third green stage 43.627
SRR8316900Third green stage 95.859
SRR8316901Third green stage 90.200
SRR8316898Complete white stage 3.279
SRR8316899Complete white stage 46.684
SRR8316903Complete white stage 6.431
SRR8316902Silver flowering stage0.701
SRR8316904Silver flowering stage0.875
SRR8316905Silver flowering stage0.215
SRR8316906Gold flowering stage 0.565
SRR8316907Gold flowering stage 0.139
SRR8316908Gold flowering stage 1.047
SRP132670SRR6706286Control87.338
SRR6706287Light intensity 50%91.873
SRR6706288Light intensity 20%111.039
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1138.273
CNS0095593Slightly white alabastrum(diploid) 2156.276
CNS0095594Slightly white alabastrum(diploid) 3128.818
CNS0095595Whole white alabastrum(diploid) 288.746
CNS0095596Whole white alabastrum(diploid) 380.391
CNS0095597Whole white alabastrum(diploid) 462.184
CNS0095598Silvery flower (diploied) 152.666
CNS0095599Silvery flower (diploied) 245.921
CNS0095600Silvery flower (diploied) 310.523
CNS0095601Golden flower (diploid) 137.859
CNS0095602Golden flower (diploid) 213.792
CNS0095603Golden flower (diploid) 314.010
CNS0095604Slightly white alabastrum(tetraploid) 1182.510
CNS0095605Slightly white alabastrum(tetraploid) 2169.394
CNS0095606Slightly white alabastrum(tetraploid) 3313.283
CNS0095607Whole white alabastrum(tetraploid) 171.644
CNS0095608Whole white alabastrum(tetraploid) 248.392
CNS0095609Whole white alabastrum(tetraploid) 3146.529
CNS0095610Silvery flower (tetraploid) 11.298
CNS0095611Silvery flower (tetraploid) 29.730
CNS0095612Silvery flower (tetraploid) 31.803
CNS0095613Golden flower (tetraploid) 10.712
CNS0095614Golden flower (tetraploid) 20.559
CNS0095615Golden flower (tetraploid) 30.629
CRA001975CRR073297Stem 1114.841
CRR073298Stem 2109.027
CRR073299Stem 399.744
CRR073300Leaf 184.676
CRR073301Leaf 281.989
CRR073302Leaf 397.796
CRR073303Juvenile bud 140.407
CRR073304Juvenile bud 244.662
CRR073305Juvenile bud 350.644
CRR073306Third green 10.888
CRR073307Third green 20.272
CRR073308Third green 30.566
CRR073309Second white 10.215
CRR073310Second white 21.489
CRR073311Second white 30.226
CRR073312Silver flowering 11.189
CRR073313Silver flowering 20.808
CRR073314Silver flowering 30.000
CRR073315Gold flowering 162.365
CRR073316Gold flowering 253.519
CRR073317Gold flowering 375.362
CRR073318Tawny withering 10.628
CRR073319Tawny withering 20.773
CRR073320Tawny withering 30.000