Detail information of GWHGAAZE021762


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO99053.11.77544E-16unnamed protein product [Coffea canephora]
COGYP_004429857.10.000005stationary-phase survival protein SurE
trEMBLtr|A0A068TUN0|A0A068TUN0_COFCA7E-17Coffea canephora DH200=94 genomic scaffold, scaffold_3 {ECO:0000313|EMBL:CDO99053.1}
TAIR10AT4G14930.14E-14Survival protein SurE-like phosphatase/nucleotidase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6091664660916861+
GWHAAZE00000006mRNA6091664660916861+
GWHAAZE00000006exon6091664660916861+
GWHAAZE00000006CDS6091664660916861+
Transcript Sequence

Network for GWHGAAZE021762

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01975.18SurE13513.90E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03787surE Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Purine metabolismmap00230
Pyrimidine metabolismmap00240
Nicotinate and nicotinamide metabolismmap00760

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf43.229
SRR3591706second leaf18.486
SRR3591707mature leaf31.538
SRR3591708Shoot apex11.584
SRR3591709Stem74.162
SRR3591710White floral bud29.065
SRR3591711White flower30.220
SRR3591712Green floral bud24.843
SRR3591713Yellow flower8.290
SRP173429 SRR8316895Juvenile bud stage 9.533
SRR8316896Juvenile bud stage 12.406
SRR8316897Juvenile bud stage 3.593
SRR8316894Third green stage 5.345
SRR8316900Third green stage 27.586
SRR8316901Third green stage 20.242
SRR8316898Complete white stage 10.066
SRR8316899Complete white stage 41.059
SRR8316903Complete white stage 17.844
SRR8316902Silver flowering stage15.792
SRR8316904Silver flowering stage14.433
SRR8316905Silver flowering stage7.614
SRR8316906Gold flowering stage 13.408
SRR8316907Gold flowering stage 16.055
SRR8316908Gold flowering stage 10.685
SRP132670SRR6706286Control28.717
SRR6706287Light intensity 50%27.722
SRR6706288Light intensity 20%28.777
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.506
CNS0095593Slightly white alabastrum(diploid) 217.825
CNS0095594Slightly white alabastrum(diploid) 315.986
CNS0095595Whole white alabastrum(diploid) 221.957
CNS0095596Whole white alabastrum(diploid) 311.837
CNS0095597Whole white alabastrum(diploid) 418.213
CNS0095598Silvery flower (diploied) 126.956
CNS0095599Silvery flower (diploied) 222.971
CNS0095600Silvery flower (diploied) 336.817
CNS0095601Golden flower (diploid) 122.354
CNS0095602Golden flower (diploid) 226.328
CNS0095603Golden flower (diploid) 324.299
CNS0095604Slightly white alabastrum(tetraploid) 125.183
CNS0095605Slightly white alabastrum(tetraploid) 215.985
CNS0095606Slightly white alabastrum(tetraploid) 334.757
CNS0095607Whole white alabastrum(tetraploid) 124.082
CNS0095608Whole white alabastrum(tetraploid) 214.879
CNS0095609Whole white alabastrum(tetraploid) 320.670
CNS0095610Silvery flower (tetraploid) 138.239
CNS0095611Silvery flower (tetraploid) 232.039
CNS0095612Silvery flower (tetraploid) 338.449
CNS0095613Golden flower (tetraploid) 112.174
CNS0095614Golden flower (tetraploid) 213.709
CNS0095615Golden flower (tetraploid) 38.866
CRA001975CRR073297Stem 122.042
CRR073298Stem 225.491
CRR073299Stem 323.922
CRR073300Leaf 138.909
CRR073301Leaf 241.505
CRR073302Leaf 345.918
CRR073303Juvenile bud 146.262
CRR073304Juvenile bud 248.602
CRR073305Juvenile bud 348.713
CRR073306Third green 197.901
CRR073307Third green 267.261
CRR073308Third green 369.950
CRR073309Second white 123.855
CRR073310Second white 225.264
CRR073311Second white 312.719
CRR073312Silver flowering 14.194
CRR073313Silver flowering 210.560
CRR073314Silver flowering 30.994
CRR073315Gold flowering 127.595
CRR073316Gold flowering 219.592
CRR073317Gold flowering 322.780
CRR073318Tawny withering 166.862
CRR073319Tawny withering 2103.265
CRR073320Tawny withering 363.331