Detail information of GWHGAAZE021807


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU18339.13.76044E-27hypothetical protein MIMGU_mgv1a011573mg [Erythranthe guttata]
Swissprottr|P48481|PP12_ACEPE6E-25Serine/threonine-protein phosphatase PP1 isozyme 2
trEMBLtr|A0A022PS58|A0A022PS58_ERYGU1E-27Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}
TAIR10AT2G39840.11E-19type one serine/threonine protein phosphatase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6178042961780829+
GWHAAZE00000006mRNA6178042961780829+
GWHAAZE00000006exon6178042961780623+
GWHAAZE00000006exon6178076461780829+
GWHAAZE00000006CDS6178042961780623+
GWHAAZE00000006CDS6178076461780829+
Transcript Sequence

Network for GWHGAAZE021807

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16891.6STPPase_N6529.60E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06269PPP1C mRNA surveillance pathway map03015
Hippo signaling pathwaymap04390
cAMP signaling pathwaymap04024
cGMP-PKG signaling pathwaymap04022
Meiosis - yeastmap04113
Oocyte meiosismap04114
Cellular senescencemap04218
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Platelet activationmap04611
Insulin signaling pathwaymap04910
Oxytocin signaling pathwaymap04921
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Inflammatory mediator regulation of TRP channelsmap04750

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.845
SRR3591706second leaf23.978
SRR3591707mature leaf51.700
SRR3591708Shoot apex25.241
SRR3591709Stem45.619
SRR3591710White floral bud44.326
SRR3591711White flower63.330
SRR3591712Green floral bud40.206
SRR3591713Yellow flower48.381
SRP173429 SRR8316895Juvenile bud stage 20.732
SRR8316896Juvenile bud stage 26.949
SRR8316897Juvenile bud stage 11.050
SRR8316894Third green stage 12.819
SRR8316900Third green stage 34.970
SRR8316901Third green stage 33.409
SRR8316898Complete white stage 30.311
SRR8316899Complete white stage 56.401
SRR8316903Complete white stage 47.600
SRR8316902Silver flowering stage29.090
SRR8316904Silver flowering stage46.375
SRR8316905Silver flowering stage18.151
SRR8316906Gold flowering stage 57.012
SRR8316907Gold flowering stage 45.994
SRR8316908Gold flowering stage 53.230
SRP132670SRR6706286Control3.662
SRR6706287Light intensity 50%4.588
SRR6706288Light intensity 20%4.950
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.002
CNS0095593Slightly white alabastrum(diploid) 211.639
CNS0095594Slightly white alabastrum(diploid) 38.943
CNS0095595Whole white alabastrum(diploid) 29.890
CNS0095596Whole white alabastrum(diploid) 310.995
CNS0095597Whole white alabastrum(diploid) 412.002
CNS0095598Silvery flower (diploied) 115.091
CNS0095599Silvery flower (diploied) 216.429
CNS0095600Silvery flower (diploied) 357.387
CNS0095601Golden flower (diploid) 115.039
CNS0095602Golden flower (diploid) 240.479
CNS0095603Golden flower (diploid) 340.458
CNS0095604Slightly white alabastrum(tetraploid) 119.405
CNS0095605Slightly white alabastrum(tetraploid) 214.249
CNS0095606Slightly white alabastrum(tetraploid) 331.266
CNS0095607Whole white alabastrum(tetraploid) 112.294
CNS0095608Whole white alabastrum(tetraploid) 29.196
CNS0095609Whole white alabastrum(tetraploid) 325.778
CNS0095610Silvery flower (tetraploid) 144.443
CNS0095611Silvery flower (tetraploid) 259.741
CNS0095612Silvery flower (tetraploid) 364.487
CNS0095613Golden flower (tetraploid) 126.272
CNS0095614Golden flower (tetraploid) 236.860
CNS0095615Golden flower (tetraploid) 349.144
CRA001975CRR073297Stem 115.502
CRR073298Stem 211.784
CRR073299Stem 314.288
CRR073300Leaf 113.921
CRR073301Leaf 29.470
CRR073302Leaf 314.707
CRR073303Juvenile bud 111.695
CRR073304Juvenile bud 213.143
CRR073305Juvenile bud 324.874
CRR073306Third green 121.172
CRR073307Third green 216.209
CRR073308Third green 312.075
CRR073309Second white 137.165
CRR073310Second white 222.862
CRR073311Second white 325.559
CRR073312Silver flowering 125.346
CRR073313Silver flowering 218.292
CRR073314Silver flowering 314.736
CRR073315Gold flowering 119.828
CRR073316Gold flowering 225.995
CRR073317Gold flowering 327.212
CRR073318Tawny withering 116.761
CRR073319Tawny withering 214.292
CRR073320Tawny withering 313.171