Detail information of GWHGAAZE021902


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007035120.19.99891E-52Glutathione S-transferase tau 7 [Theobroma cacao]
COGYP_004929170.15E-14maleylacetoacetate isomerase
Swissprottr|Q9ZW30|GSTU1_ARATH8E-48Glutathione S-transferase U1
trEMBLtr|A0A061EMG5|A0A061EMG5_THECC4E-52Glutathione S-transferase tau 7 {ECO:0000313|EMBL:EOY06046.1}
TAIR10AT2G29490.14E-39glutathione S-transferase TAU 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6367411763674491-
GWHAAZE00000006mRNA6367411763674491-
GWHAAZE00000006exon6367411763674491-
GWHAAZE00000006CDS6367411763674491-
Transcript Sequence

Network for GWHGAAZE021902

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N5774.40E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.616
SRR3591706second leaf7.923
SRR3591707mature leaf22.317
SRR3591708Shoot apex3.218
SRR3591709Stem1.128
SRR3591710White floral bud3.694
SRR3591711White flower17.144
SRR3591712Green floral bud6.110
SRR3591713Yellow flower26.826
SRP173429 SRR8316895Juvenile bud stage 0.973
SRR8316896Juvenile bud stage 0.601
SRR8316897Juvenile bud stage 3.386
SRR8316894Third green stage 0.509
SRR8316900Third green stage 1.556
SRR8316901Third green stage 1.285
SRR8316898Complete white stage 0.507
SRR8316899Complete white stage 0.681
SRR8316903Complete white stage 1.308
SRR8316902Silver flowering stage1.835
SRR8316904Silver flowering stage1.477
SRR8316905Silver flowering stage1.568
SRR8316906Gold flowering stage 9.034
SRR8316907Gold flowering stage 5.673
SRR8316908Gold flowering stage 13.307
SRP132670SRR6706286Control1.380
SRR6706287Light intensity 50%0.662
SRR6706288Light intensity 20%0.519
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.309
CNS0095593Slightly white alabastrum(diploid) 20.899
CNS0095594Slightly white alabastrum(diploid) 30.534
CNS0095595Whole white alabastrum(diploid) 20.557
CNS0095596Whole white alabastrum(diploid) 30.256
CNS0095597Whole white alabastrum(diploid) 40.113
CNS0095598Silvery flower (diploied) 14.361
CNS0095599Silvery flower (diploied) 22.820
CNS0095600Silvery flower (diploied) 33.045
CNS0095601Golden flower (diploid) 15.932
CNS0095602Golden flower (diploid) 28.451
CNS0095603Golden flower (diploid) 35.431
CNS0095604Slightly white alabastrum(tetraploid) 11.522
CNS0095605Slightly white alabastrum(tetraploid) 21.322
CNS0095606Slightly white alabastrum(tetraploid) 32.195
CNS0095607Whole white alabastrum(tetraploid) 10.624
CNS0095608Whole white alabastrum(tetraploid) 20.958
CNS0095609Whole white alabastrum(tetraploid) 30.221
CNS0095610Silvery flower (tetraploid) 120.821
CNS0095611Silvery flower (tetraploid) 214.787
CNS0095612Silvery flower (tetraploid) 37.362
CNS0095613Golden flower (tetraploid) 15.061
CNS0095614Golden flower (tetraploid) 214.535
CNS0095615Golden flower (tetraploid) 39.140
CRA001975CRR073297Stem 12.392
CRR073298Stem 21.560
CRR073299Stem 31.803
CRR073300Leaf 10.442
CRR073301Leaf 20.655
CRR073302Leaf 30.196
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.054
CRR073305Juvenile bud 30.000
CRR073306Third green 10.122
CRR073307Third green 20.205
CRR073308Third green 30.209
CRR073309Second white 10.320
CRR073310Second white 20.121
CRR073311Second white 30.293
CRR073312Silver flowering 10.275
CRR073313Silver flowering 20.754
CRR073314Silver flowering 32.799
CRR073315Gold flowering 16.530
CRR073316Gold flowering 26.211
CRR073317Gold flowering 36.803
CRR073318Tawny withering 11.934
CRR073319Tawny withering 27.692
CRR073320Tawny withering 32.492