Detail information of GWHGAAZE021932


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002285610.13.1061E-110PREDICTED: PHD finger protein ING1 [Vitis vinifera]
Swissprottr|Q9LIQ6|ING1_ARATH6E-87PHD finger protein ING1
trEMBLtr|D7TS58|D7TS58_VITVI1E-110PHD finger protein ING {ECO:0000256|RuleBase:RU361213}
TAIR10AT3G24010.16E-68RING/FYVE/PHD zinc finger superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6425624264258961-
GWHAAZE00000006mRNA6425624264258961-
GWHAAZE00000006exon6425624264256352-
GWHAAZE00000006exon6425648364256627-
GWHAAZE00000006exon6425719464257293-
GWHAAZE00000006exon6425763264257695-
GWHAAZE00000006exon6425874664258961-
GWHAAZE00000006CDS6425874664258961-
GWHAAZE00000006CDS6425763264257695-
GWHAAZE00000006CDS6425719464257293-
GWHAAZE00000006CDS6425648364256627-
GWHAAZE00000006CDS6425624264256352-
Transcript Sequence

Network for GWHGAAZE021932

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0244
CFinderModule0277


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12998.8ING10871.50E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.245
SRR3591706second leaf20.354
SRR3591707mature leaf23.261
SRR3591708Shoot apex27.031
SRR3591709Stem28.180
SRR3591710White floral bud24.453
SRR3591711White flower33.830
SRR3591712Green floral bud22.186
SRR3591713Yellow flower27.161
SRP173429 SRR8316895Juvenile bud stage 15.460
SRR8316896Juvenile bud stage 18.859
SRR8316897Juvenile bud stage 8.066
SRR8316894Third green stage 9.500
SRR8316900Third green stage 21.918
SRR8316901Third green stage 20.208
SRR8316898Complete white stage 10.997
SRR8316899Complete white stage 39.303
SRR8316903Complete white stage 14.665
SRR8316902Silver flowering stage11.544
SRR8316904Silver flowering stage13.834
SRR8316905Silver flowering stage6.682
SRR8316906Gold flowering stage 25.688
SRR8316907Gold flowering stage 24.047
SRR8316908Gold flowering stage 21.123
SRP132670SRR6706286Control28.706
SRR6706287Light intensity 50%25.981
SRR6706288Light intensity 20%25.554
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.281
CNS0095593Slightly white alabastrum(diploid) 225.279
CNS0095594Slightly white alabastrum(diploid) 322.350
CNS0095595Whole white alabastrum(diploid) 224.016
CNS0095596Whole white alabastrum(diploid) 319.189
CNS0095597Whole white alabastrum(diploid) 419.794
CNS0095598Silvery flower (diploied) 132.302
CNS0095599Silvery flower (diploied) 228.097
CNS0095600Silvery flower (diploied) 330.236
CNS0095601Golden flower (diploid) 129.529
CNS0095602Golden flower (diploid) 227.615
CNS0095603Golden flower (diploid) 327.861
CNS0095604Slightly white alabastrum(tetraploid) 130.772
CNS0095605Slightly white alabastrum(tetraploid) 223.231
CNS0095606Slightly white alabastrum(tetraploid) 339.417
CNS0095607Whole white alabastrum(tetraploid) 125.052
CNS0095608Whole white alabastrum(tetraploid) 218.577
CNS0095609Whole white alabastrum(tetraploid) 328.290
CNS0095610Silvery flower (tetraploid) 133.811
CNS0095611Silvery flower (tetraploid) 231.353
CNS0095612Silvery flower (tetraploid) 327.030
CNS0095613Golden flower (tetraploid) 128.790
CNS0095614Golden flower (tetraploid) 232.059
CNS0095615Golden flower (tetraploid) 321.065
CRA001975CRR073297Stem 117.708
CRR073298Stem 217.076
CRR073299Stem 319.058
CRR073300Leaf 121.441
CRR073301Leaf 219.253
CRR073302Leaf 315.155
CRR073303Juvenile bud 116.080
CRR073304Juvenile bud 212.239
CRR073305Juvenile bud 313.766
CRR073306Third green 16.629
CRR073307Third green 28.281
CRR073308Third green 34.869
CRR073309Second white 19.040
CRR073310Second white 29.143
CRR073311Second white 38.814
CRR073312Silver flowering 18.446
CRR073313Silver flowering 26.153
CRR073314Silver flowering 37.457
CRR073315Gold flowering 114.547
CRR073316Gold flowering 216.732
CRR073317Gold flowering 39.903
CRR073318Tawny withering 120.120
CRR073319Tawny withering 224.927
CRR073320Tawny withering 318.514