Detail information of GWHGAAZE021936


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010656329.11.1337E-133PREDICTED: uncharacterized protein LOC100245756 isoform X2 [Vitis vinifera]
COGYP_008797956.18E-15ubiquitin-conjugating enzyme E2-like protein
Swissprottr|Q941B6|UBC37_ARATH6E-96Probable ubiquitin-conjugating enzyme E2 37
trEMBLtr|A0A061GMQ5|A0A061GMQ5_THECC1E-124Ubiquitin-conjugating enzyme 37, putative {ECO:0000313|EMBL:EOY30811.1}
TAIR10AT3G24515.18E-78ubiquitin-conjugating enzyme 37

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6429654664300277-
GWHAAZE00000006mRNA6429654664300277-
GWHAAZE00000006exon6429654664297514-
GWHAAZE00000006exon6429759064297721-
GWHAAZE00000006exon6429782264297920-
GWHAAZE00000006exon6429896064299065-
GWHAAZE00000006exon6429916764299236-
GWHAAZE00000006exon6430013664300277-
GWHAAZE00000006CDS6430013664300277-
GWHAAZE00000006CDS6429916764299236-
GWHAAZE00000006CDS6429896064299065-
GWHAAZE00000006CDS6429782264297920-
GWHAAZE00000006CDS6429759064297721-
GWHAAZE00000006CDS6429654664297514-
Transcript Sequence

Network for GWHGAAZE021936

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con101566.00E-38
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K13960UBE2T, HSPC150 Fanconi anemia pathway map03460

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.654
SRR3591706second leaf1.111
SRR3591707mature leaf0.079
SRR3591708Shoot apex8.106
SRR3591709Stem2.021
SRR3591710White floral bud0.632
SRR3591711White flower0.312
SRR3591712Green floral bud1.518
SRR3591713Yellow flower0.394
SRP173429 SRR8316895Juvenile bud stage 1.789
SRR8316896Juvenile bud stage 3.562
SRR8316897Juvenile bud stage 0.655
SRR8316894Third green stage 1.059
SRR8316900Third green stage 3.792
SRR8316901Third green stage 3.510
SRR8316898Complete white stage 0.244
SRR8316899Complete white stage 1.647
SRR8316903Complete white stage 0.726
SRR8316902Silver flowering stage0.157
SRR8316904Silver flowering stage0.261
SRR8316905Silver flowering stage0.298
SRR8316906Gold flowering stage 0.409
SRR8316907Gold flowering stage 0.381
SRR8316908Gold flowering stage 0.328
SRP132670SRR6706286Control2.153
SRR6706287Light intensity 50%2.023
SRR6706288Light intensity 20%1.490
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.766
CNS0095593Slightly white alabastrum(diploid) 21.401
CNS0095594Slightly white alabastrum(diploid) 31.258
CNS0095595Whole white alabastrum(diploid) 21.733
CNS0095596Whole white alabastrum(diploid) 31.562
CNS0095597Whole white alabastrum(diploid) 40.937
CNS0095598Silvery flower (diploied) 10.508
CNS0095599Silvery flower (diploied) 21.411
CNS0095600Silvery flower (diploied) 30.723
CNS0095601Golden flower (diploid) 10.700
CNS0095602Golden flower (diploid) 20.376
CNS0095603Golden flower (diploid) 30.420
CNS0095604Slightly white alabastrum(tetraploid) 16.717
CNS0095605Slightly white alabastrum(tetraploid) 25.613
CNS0095606Slightly white alabastrum(tetraploid) 310.944
CNS0095607Whole white alabastrum(tetraploid) 14.851
CNS0095608Whole white alabastrum(tetraploid) 23.747
CNS0095609Whole white alabastrum(tetraploid) 36.779
CNS0095610Silvery flower (tetraploid) 13.264
CNS0095611Silvery flower (tetraploid) 22.361
CNS0095612Silvery flower (tetraploid) 32.277
CNS0095613Golden flower (tetraploid) 11.682
CNS0095614Golden flower (tetraploid) 22.321
CNS0095615Golden flower (tetraploid) 30.711
CRA001975CRR073297Stem 12.567
CRR073298Stem 22.908
CRR073299Stem 32.376
CRR073300Leaf 13.009
CRR073301Leaf 23.110
CRR073302Leaf 31.881
CRR073303Juvenile bud 10.524
CRR073304Juvenile bud 20.203
CRR073305Juvenile bud 30.832
CRR073306Third green 10.056
CRR073307Third green 20.041
CRR073308Third green 30.036
CRR073309Second white 10.182
CRR073310Second white 20.228
CRR073311Second white 30.143
CRR073312Silver flowering 10.443
CRR073313Silver flowering 20.163
CRR073314Silver flowering 30.105
CRR073315Gold flowering 10.071
CRR073316Gold flowering 20.039
CRR073317Gold flowering 30.251
CRR073318Tawny withering 13.473
CRR073319Tawny withering 21.333
CRR073320Tawny withering 33.910