Gene detail

Detail information of GWHGAAZE021960

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	ABE01402.1	0	ATP-sulfurylase [Camellia sinensis]
COG	YP_003704411.1	4E-52	sulfate adenylyltransferase
Swissprot	tr\|Q9LIK9\|APS1_ARATH	0	ATP sulfurylase 1, chloroplastic (Precursor)
trEMBL	tr\|Q1W2K0\|Q1W2K0_CAMSI	0	ATP-sulfurylase {ECO:0000313\|EMBL:ABE01402.1}
TAIR10	AT3G22890.1	0	ATP sulfurylase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	64736066	64741409	+
GWHAAZE00000006	mRNA	64736066	64741409	+
GWHAAZE00000006	exon	64736066	64736562	+
GWHAAZE00000006	exon	64738575	64738980	+
GWHAAZE00000006	exon	64739887	64740147	+
GWHAAZE00000006	exon	64740668	64740754	+
GWHAAZE00000006	exon	64741272	64741409	+
GWHAAZE00000006	CDS	64736066	64736562	+
GWHAAZE00000006	CDS	64738575	64738980	+
GWHAAZE00000006	CDS	64739887	64740147	+
GWHAAZE00000006	CDS	64740668	64740754	+
GWHAAZE00000006	CDS	64741272	64741409	+

Transcript Sequence
>GWHTAAZE021986 ATGGCGACAATGAGCAAAGCTCTCATCAAAACCCCAAATCCATCCCACTCTTTCCCCAAAACCCACAAGACCCATTTCCCTAAACCCCTCAATTTCGCCCTCTCCTCCCGCTCGGCCACCCAAAAGACCCGAATCTCATGCGGGTTGATCGAACCGGATGGGGGAAAGCTGGTGGAGCTCGTCGTTAAAGAATCCCAAAGAGATTTGAAACAGAGAGAGGCTTTATCAATGCCCAAAATCAAGCTGAGTCAGGTGGATCTAGAGTGGGTCCATGTTCTTAGCGAGGGGTGGGCGAGTCCACTCGGCGGGTTCATGAGAGAATCCGAGTTCCTCCAAACACTTCATTTCGGTTGCCTCAGGTTGGCCGACGGCACTTTCGTCAACATGTCGTTGCCGATTGTTCTAGCAATCGACGATGACCAGAAGGGTCGCGTCGGTGGGTCGGGTTCGGTTGCGCTTGTTGACTCCGGGGATAACCCGGTTGCTATTTTGAGCAACATCGAGATCTACAAGCATAACAAAGAAGAACGAATAGCAAGAACTTGGGGTTGTACTGCACCTGGTCTCCCTTACGTCGAAGAAGCCATAACCAACTCTGGGAACTGGCTAATCGGAGGTGATTTAGAGGTTATAAAACCTATCAAGTACAACGATGGGCTTGATCGGTTCCGACTATCTCCTGCCGAACTCCGCGAAGAATTCACAAGGCGTGATGCCGACGCGGTGTTTGCCTTCCAGTTGAGGAATCCGGTCCACAACGGTCACGCTTTGCTGATGACTGACACTCGCCGTCGGCTCCTGGAGATGGGGTATAAGAACCCGGTTCTCTTGCTTCATCCTTTGGGAGGATACACCAAGGCCGATGATGTTCCTCTTAGTTGGCGCATGAAGCAGCATGAAAAGGTGCTTGAGGATGGTGTTCTTGATCCAGAGACAACGGTGGTTTCTATATTCCCGTCTCCCATGCACTATGCAGGACCCACTGAGGTGCAGTGGCATGCCAAGGCTCGGATCAACGCTGGTGCCAACTTCTACATTGTGGGCCGGGACCCCGCTGGAATGAGTCACCCCGTAGAAAAACGGGATTTATACGATGCGGACCATGGCAAGAAGGTTCTAAGCATGGCTCCTGGATTAGAGCGCCTCAATATCCTCCCATTCAAGGTGGCGGCATATGATAAGACTCAGGGTAAAATGGCATTCTTTGATCCATCCAGGCCCCAAGATTTTCTCTTCATTTCGGGGACCAAGATGCGAACGCTTGCTAAGAACAAGGAGAACCCACCCGATGGATTCATGTGCCCCGGTGGTTGGAAGGTCTTGGTTGATTACTATGACAGTTTGGCTCCGGTTGAGAATGGCAGAGTCAAGCAGCCTGTTCCAGCATGA

Network for GWHGAAZE021960

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14306.7	PUA_2	50	212	7.40E-45
PF01747.18	ATP-sulfurylase	222	443	4.80E-66

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13811	PAPSS	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Sulfur metabolism	map00920
		Purine metabolism	map00230
		Selenocompound metabolism	map00450
		Monobactam biosynthesis	map00261

Gene Ontology

GO term	Ontology	Name
GO:0000103	biological_process	sulfate assimilation
GO:0004781	molecular_function	sulfate adenylyltransferase (ATP) activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	147.535
	SRR3591706	second leaf	145.271
	SRR3591707	mature leaf	95.405
	SRR3591708	Shoot apex	86.616
	SRR3591709	Stem	92.913
	SRR3591710	White floral bud	147.102
	SRR3591711	White flower	169.127
	SRR3591712	Green floral bud	132.557
	SRR3591713	Yellow flower	248.224
SRP173429	SRR8316895	Juvenile bud stage	60.722
	SRR8316896	Juvenile bud stage	79.619
	SRR8316897	Juvenile bud stage	40.438
	SRR8316894	Third green stage	37.081
	SRR8316900	Third green stage	114.130
	SRR8316901	Third green stage	131.655
	SRR8316898	Complete white stage	80.182
	SRR8316899	Complete white stage	266.953
	SRR8316903	Complete white stage	100.095
	SRR8316902	Silver flowering stage	61.717
	SRR8316904	Silver flowering stage	71.862
	SRR8316905	Silver flowering stage	49.687
	SRR8316906	Gold flowering stage	146.540
	SRR8316907	Gold flowering stage	154.377
	SRR8316908	Gold flowering stage	205.075
SRP132670	SRR6706286	Control	109.702
	SRR6706287	Light intensity 50%	107.929
	SRR6706288	Light intensity 20%	120.223
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	98.925
	CNS0095593	Slightly white alabastrum(diploid) 2	127.418
	CNS0095594	Slightly white alabastrum(diploid) 3	78.888
	CNS0095595	Whole white alabastrum(diploid) 2	83.074
	CNS0095596	Whole white alabastrum(diploid) 3	91.495
	CNS0095597	Whole white alabastrum(diploid) 4	111.766
	CNS0095598	Silvery flower (diploied) 1	136.288
	CNS0095599	Silvery flower (diploied) 2	94.097
	CNS0095600	Silvery flower (diploied) 3	186.886
	CNS0095601	Golden flower (diploid) 1	97.558
	CNS0095602	Golden flower (diploid) 2	127.865
	CNS0095603	Golden flower (diploid) 3	124.323
	CNS0095604	Slightly white alabastrum(tetraploid) 1	123.842
	CNS0095605	Slightly white alabastrum(tetraploid) 2	138.440
	CNS0095606	Slightly white alabastrum(tetraploid) 3	245.906
	CNS0095607	Whole white alabastrum(tetraploid) 1	65.233
	CNS0095608	Whole white alabastrum(tetraploid) 2	66.919
	CNS0095609	Whole white alabastrum(tetraploid) 3	159.216
	CNS0095610	Silvery flower (tetraploid) 1	133.107
	CNS0095611	Silvery flower (tetraploid) 2	353.544
	CNS0095612	Silvery flower (tetraploid) 3	427.864
	CNS0095613	Golden flower (tetraploid) 1	66.361
	CNS0095614	Golden flower (tetraploid) 2	83.946
	CNS0095615	Golden flower (tetraploid) 3	211.730
CRA001975	CRR073297	Stem 1	142.165
	CRR073298	Stem 2	129.944
	CRR073299	Stem 3	203.271
	CRR073300	Leaf 1	215.471
	CRR073301	Leaf 2	231.238
	CRR073302	Leaf 3	253.229
	CRR073303	Juvenile bud 1	388.361
	CRR073304	Juvenile bud 2	287.156
	CRR073305	Juvenile bud 3	486.511
	CRR073306	Third green 1	241.109
	CRR073307	Third green 2	238.389
	CRR073308	Third green 3	179.720
	CRR073309	Second white 1	316.977
	CRR073310	Second white 2	191.715
	CRR073311	Second white 3	172.507
	CRR073312	Silver flowering 1	168.826
	CRR073313	Silver flowering 2	246.590
	CRR073314	Silver flowering 3	165.166
	CRR073315	Gold flowering 1	73.671
	CRR073316	Gold flowering 2	70.339
	CRR073317	Gold flowering 3	92.257
	CRR073318	Tawny withering 1	121.477
	CRR073319	Tawny withering 2	132.754
	CRR073320	Tawny withering 3	102.911