Gene detail

Detail information of GWHGAAZE021967

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010024218.1	9.8499E-162	PREDICTED: ATP sulfurylase 1, chloroplastic-like [Eucalyptus grandis]
COG	NP_244252.1	9E-30	sulfate adenylyltransferase
Swissprot	tr\|Q9LIK9\|APS1_ARATH	1E-158	ATP sulfurylase 1, chloroplastic (Precursor)
trEMBL	tr\|A0A059B361\|A0A059B361_EUCGR	4E-162	Uncharacterized protein {ECO:0000313\|EMBL:KCW60677.1}
TAIR10	AT3G22890.1	8E-128	ATP sulfurylase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	64880336	64883043	+
GWHAAZE00000006	mRNA	64880336	64883043	+
GWHAAZE00000006	exon	64880336	64880584	+
GWHAAZE00000006	exon	64881486	64881746	+
GWHAAZE00000006	exon	64882296	64882382	+
GWHAAZE00000006	exon	64882906	64883043	+
GWHAAZE00000006	CDS	64880336	64880584	+
GWHAAZE00000006	CDS	64881486	64881746	+
GWHAAZE00000006	CDS	64882296	64882382	+
GWHAAZE00000006	CDS	64882906	64883043	+

Transcript Sequence
>GWHTAAZE021993 ATGGGCTTGATCGGTTCGACTATCTCCTGCCGAACTCGCGAAGAATTCACAAGGCGTGATGCCGACGCGGTGTTTGCCTTCCAGTTGAGGAATCCGGTCCACAACGGTCACGCTTTGCTGATGACTGACACTCGCCGTCGGCTCCTGGAGATGGGGTATAAGAACCCGGTTCTCTTGCTTCATCCTTTGGGAGGATACACCAAGGCCGATGATGTTCCTCTTAGTTGGCGCATGAAGCAGCATGAAAAGGTGCTTGAGGATGGTGTTCTTGATCCAGAGACAACGGTGGTTTCTATATTCCCGTCTCCCATGCACTATGCAGGACCCACTGAGGTGCAGTGGCATGCCAAGGCTCGGATCAACGCTGGTGCCAACTTCTACATTGTGGGCCGGGACCCCGCTGGAATGAGTCACCCCGTAGAAAAACGGGATTTATACGATGCGGACCATGGCAAGAAGGTTCTAAGCATGGCTCCTGGATTAGAGCGCCTCAATATCCTCCCATTCAAGGTGGCGGCATATGATAAGACTCAGGGTAAAATGGCATTCTTTGATCCATCCAGGCCCCAAGATTTTCTCTTCATTTCGGGGACCAAGATGCGAACGCTTGCTAAGAACAAGGAGAACCCACCCGATGGATTCATGTGCCCCGGTGGTTGGAAGGTCTTGGTTGATTACTATGACAGTTTGGCTCCGGTTGAGAATGGCAGAGTCAAGCAGCCTGTTCCAGCATGA

Network for GWHGAAZE021967

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01747.18	ATP-sulfurylase	12	225	5.10E-63

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13811	PAPSS	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Sulfur metabolism	map00920
		Purine metabolism	map00230
		Selenocompound metabolism	map00450
		Monobactam biosynthesis	map00261

Gene Ontology

GO term	Ontology	Name
GO:0004781	molecular_function	sulfate adenylyltransferase (ATP) activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	130.184
	SRR3591706	second leaf	134.279
	SRR3591707	mature leaf	88.362
	SRR3591708	Shoot apex	82.381
	SRR3591709	Stem	91.040
	SRR3591710	White floral bud	130.053
	SRR3591711	White flower	157.032
	SRR3591712	Green floral bud	127.352
	SRR3591713	Yellow flower	223.878
SRP173429	SRR8316895	Juvenile bud stage	53.582
	SRR8316896	Juvenile bud stage	71.703
	SRR8316897	Juvenile bud stage	31.699
	SRR8316894	Third green stage	31.412
	SRR8316900	Third green stage	97.654
	SRR8316901	Third green stage	121.600
	SRR8316898	Complete white stage	69.821
	SRR8316899	Complete white stage	226.519
	SRR8316903	Complete white stage	80.730
	SRR8316902	Silver flowering stage	55.499
	SRR8316904	Silver flowering stage	62.808
	SRR8316905	Silver flowering stage	40.693
	SRR8316906	Gold flowering stage	122.052
	SRR8316907	Gold flowering stage	133.013
	SRR8316908	Gold flowering stage	126.999
SRP132670	SRR6706286	Control	99.024
	SRR6706287	Light intensity 50%	98.803
	SRR6706288	Light intensity 20%	103.484
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	114.340
	CNS0095593	Slightly white alabastrum(diploid) 2	145.520
	CNS0095594	Slightly white alabastrum(diploid) 3	90.447
	CNS0095595	Whole white alabastrum(diploid) 2	91.318
	CNS0095596	Whole white alabastrum(diploid) 3	104.541
	CNS0095597	Whole white alabastrum(diploid) 4	116.011
	CNS0095598	Silvery flower (diploied) 1	133.071
	CNS0095599	Silvery flower (diploied) 2	93.419
	CNS0095600	Silvery flower (diploied) 3	156.616
	CNS0095601	Golden flower (diploid) 1	107.480
	CNS0095602	Golden flower (diploid) 2	105.702
	CNS0095603	Golden flower (diploid) 3	102.107
	CNS0095604	Slightly white alabastrum(tetraploid) 1	109.964
	CNS0095605	Slightly white alabastrum(tetraploid) 2	141.898
	CNS0095606	Slightly white alabastrum(tetraploid) 3	204.564
	CNS0095607	Whole white alabastrum(tetraploid) 1	69.255
	CNS0095608	Whole white alabastrum(tetraploid) 2	78.577
	CNS0095609	Whole white alabastrum(tetraploid) 3	135.757
	CNS0095610	Silvery flower (tetraploid) 1	109.762
	CNS0095611	Silvery flower (tetraploid) 2	258.789
	CNS0095612	Silvery flower (tetraploid) 3	333.339
	CNS0095613	Golden flower (tetraploid) 1	68.207
	CNS0095614	Golden flower (tetraploid) 2	75.646
	CNS0095615	Golden flower (tetraploid) 3	160.307
CRA001975	CRR073297	Stem 1	119.452
	CRR073298	Stem 2	108.781
	CRR073299	Stem 3	171.504
	CRR073300	Leaf 1	181.024
	CRR073301	Leaf 2	206.230
	CRR073302	Leaf 3	204.305
	CRR073303	Juvenile bud 1	325.708
	CRR073304	Juvenile bud 2	234.995
	CRR073305	Juvenile bud 3	392.190
	CRR073306	Third green 1	197.098
	CRR073307	Third green 2	192.007
	CRR073308	Third green 3	148.431
	CRR073309	Second white 1	261.743
	CRR073310	Second white 2	150.900
	CRR073311	Second white 3	129.015
	CRR073312	Silver flowering 1	108.020
	CRR073313	Silver flowering 2	199.799
	CRR073314	Silver flowering 3	125.901
	CRR073315	Gold flowering 1	53.504
	CRR073316	Gold flowering 2	54.613
	CRR073317	Gold flowering 3	78.753
	CRR073318	Tawny withering 1	111.760
	CRR073319	Tawny withering 2	127.000
	CRR073320	Tawny withering 3	88.922