Gene detail

Detail information of GWHGAAZE022082

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002278411.1	3.26815E-81	PREDICTED: histidine-containing phosphotransfer protein 1 [Vitis vinifera]
Swissprot	tr\|Q9ZNV9\|AHP1_ARATH	1E-60	Histidine-containing phosphotransfer protein 1
trEMBL	tr\|D7T6M0\|D7T6M0_VITVI	1E-81	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI26141.3}
TAIR10	AT3G21510.1	2E-48	histidine-containing phosphotransmitter 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	66600376	66602017	+
GWHAAZE00000006	mRNA	66600376	66602017	+
GWHAAZE00000006	exon	66600376	66600435	+
GWHAAZE00000006	exon	66600541	66600661	+
GWHAAZE00000006	exon	66600778	66600844	+
GWHAAZE00000006	exon	66601395	66601466	+
GWHAAZE00000006	exon	66601619	66601691	+
GWHAAZE00000006	exon	66601809	66602017	+
GWHAAZE00000006	CDS	66600376	66600435	+
GWHAAZE00000006	CDS	66600541	66600661	+
GWHAAZE00000006	CDS	66600778	66600844	+
GWHAAZE00000006	CDS	66601395	66601466	+
GWHAAZE00000006	CDS	66601619	66601691	+
GWHAAZE00000006	CDS	66601809	66601877	+
GWHAAZE00000006	three_prime_UTR	66601878	66602017	+

Transcript Sequence
>GWHTAAZE022110 ATGGAGGTAGGCCAGTTGCAAAGGAGATTTGTTGAGTATACAGCATCATTGTTTGGTGAGGAGTTCTTGGATGCTCAGTTTACACAGCTTCAGCAGCTACAAGATGAGAGCAACCCTGACTTTGTGGTTGAAGTGGTTTCTCTCTTCTTTGATGACTCTGAAAAGCTTCTCAATGATCTCAAACAGCAAAATGTGGATTTTAAAAGGGTTGATGCACATGTTCACCAGCTCAAAGGCAGCAGTTCCAGCATTGGTGCTCAGAGAGTTAAAAATGCCTGCATTTCATTTCGCAACTTCTGCGACGAACAGAACATTGAAGCATGCTTGAGATGTCTTCAACAAGTGAAACAGGAGTGCGCCATTGTGAAGAACAAGCTTGACACCCTGTTCAGGTTGGAGCAGCAGATTTTGGAAGCTGGTGGGGCAGTTCCTATAGTGGGATGGAAAGGAACTCAAAATTAGGGATAAGTAAAGTAAATTTCAGATTTGGTTGGTTTGTAAGTTTTCTATTTAACTACTATCTTGAAGCTTATTTAGCTATGGAGGTTGTACTTCATGTGGATTATAATGAAAAAGAGGGCTAAAATGCCCTTTCGTGTGTA

Network for GWHGAAZE022082

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01627.24	Hpt	44	120	5.90E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14490	AHP	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name
GO:0000160	biological_process	phosphorelay signal transduction system

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	84.804
	SRR3591706	second leaf	100.147
	SRR3591707	mature leaf	133.550
	SRR3591708	Shoot apex	68.555
	SRR3591709	Stem	82.532
	SRR3591710	White floral bud	27.624
	SRR3591711	White flower	37.879
	SRR3591712	Green floral bud	31.719
	SRR3591713	Yellow flower	6.549
SRP173429	SRR8316895	Juvenile bud stage	27.087
	SRR8316896	Juvenile bud stage	24.390
	SRR8316897	Juvenile bud stage	22.919
	SRR8316894	Third green stage	14.746
	SRR8316900	Third green stage	38.819
	SRR8316901	Third green stage	24.851
	SRR8316898	Complete white stage	5.441
	SRR8316899	Complete white stage	26.792
	SRR8316903	Complete white stage	18.309
	SRR8316902	Silver flowering stage	1.499
	SRR8316904	Silver flowering stage	1.543
	SRR8316905	Silver flowering stage	0.434
	SRR8316906	Gold flowering stage	3.445
	SRR8316907	Gold flowering stage	6.735
	SRR8316908	Gold flowering stage	7.011
SRP132670	SRR6706286	Control	24.379
	SRR6706287	Light intensity 50%	31.959
	SRR6706288	Light intensity 20%	33.836
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	37.549
	CNS0095593	Slightly white alabastrum(diploid) 2	48.321
	CNS0095594	Slightly white alabastrum(diploid) 3	36.873
	CNS0095595	Whole white alabastrum(diploid) 2	47.640
	CNS0095596	Whole white alabastrum(diploid) 3	33.492
	CNS0095597	Whole white alabastrum(diploid) 4	32.188
	CNS0095598	Silvery flower (diploied) 1	125.141
	CNS0095599	Silvery flower (diploied) 2	99.322
	CNS0095600	Silvery flower (diploied) 3	28.820
	CNS0095601	Golden flower (diploid) 1	71.250
	CNS0095602	Golden flower (diploid) 2	32.720
	CNS0095603	Golden flower (diploid) 3	28.616
	CNS0095604	Slightly white alabastrum(tetraploid) 1	63.744
	CNS0095605	Slightly white alabastrum(tetraploid) 2	58.255
	CNS0095606	Slightly white alabastrum(tetraploid) 3	79.773
	CNS0095607	Whole white alabastrum(tetraploid) 1	49.288
	CNS0095608	Whole white alabastrum(tetraploid) 2	22.259
	CNS0095609	Whole white alabastrum(tetraploid) 3	45.658
	CNS0095610	Silvery flower (tetraploid) 1	10.034
	CNS0095611	Silvery flower (tetraploid) 2	19.174
	CNS0095612	Silvery flower (tetraploid) 3	8.815
	CNS0095613	Golden flower (tetraploid) 1	7.263
	CNS0095614	Golden flower (tetraploid) 2	13.886
	CNS0095615	Golden flower (tetraploid) 3	4.297
CRA001975	CRR073297	Stem 1	51.067
	CRR073298	Stem 2	46.994
	CRR073299	Stem 3	55.736
	CRR073300	Leaf 1	37.162
	CRR073301	Leaf 2	40.083
	CRR073302	Leaf 3	64.719
	CRR073303	Juvenile bud 1	19.360
	CRR073304	Juvenile bud 2	20.868
	CRR073305	Juvenile bud 3	13.556
	CRR073306	Third green 1	3.550
	CRR073307	Third green 2	1.643
	CRR073308	Third green 3	2.047
	CRR073309	Second white 1	0.627
	CRR073310	Second white 2	1.759
	CRR073311	Second white 3	1.714
	CRR073312	Silver flowering 1	0.588
	CRR073313	Silver flowering 2	0.141
	CRR073314	Silver flowering 3	1.483
	CRR073315	Gold flowering 1	14.562
	CRR073316	Gold flowering 2	15.600
	CRR073317	Gold flowering 3	8.114
	CRR073318	Tawny withering 1	27.637
	CRR073319	Tawny withering 2	45.039
	CRR073320	Tawny withering 3	33.062