Detail information of GWHGAAZE022152


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008223191.10PREDICTED: uncharacterized protein LOC103323014 [Prunus mume]
Swissprottr|Q9XHZ8|Y1178_ARATH0.0000002BTB/POZ domain-containing protein At1g21780
trEMBLtr|M5XKA6|M5XKA6_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ26497.1}
TAIR10AT4G15840.17E-119BTB/POZ domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6769580967700112+
GWHAAZE00000006mRNA6769580967700112+
GWHAAZE00000006exon6769580967696241+
GWHAAZE00000006exon6769775067697933+
GWHAAZE00000006exon6769818967698257+
GWHAAZE00000006exon6769835367698451+
GWHAAZE00000006exon6769879567698896+
GWHAAZE00000006exon6769925267699331+
GWHAAZE00000006exon6769942567700112+
GWHAAZE00000006five_prime_UTR6769580967695987+
GWHAAZE00000006CDS6769598867696241+
GWHAAZE00000006CDS6769775067697933+
GWHAAZE00000006CDS6769818967698257+
GWHAAZE00000006CDS6769835367698451+
GWHAAZE00000006CDS6769879567698896+
GWHAAZE00000006CDS6769925267699331+
GWHAAZE00000006CDS6769942567700112+
Transcript Sequence

Network for GWHGAAZE022152

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.32BTB541581.90E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.371
SRR3591706second leaf12.510
SRR3591707mature leaf10.706
SRR3591708Shoot apex17.181
SRR3591709Stem25.619
SRR3591710White floral bud23.135
SRR3591711White flower31.070
SRR3591712Green floral bud16.943
SRR3591713Yellow flower27.478
SRP173429 SRR8316895Juvenile bud stage 8.604
SRR8316896Juvenile bud stage 13.436
SRR8316897Juvenile bud stage 6.696
SRR8316894Third green stage 6.574
SRR8316900Third green stage 14.223
SRR8316901Third green stage 13.295
SRR8316898Complete white stage 6.357
SRR8316899Complete white stage 17.542
SRR8316903Complete white stage 11.054
SRR8316902Silver flowering stage7.268
SRR8316904Silver flowering stage13.582
SRR8316905Silver flowering stage5.655
SRR8316906Gold flowering stage 22.320
SRR8316907Gold flowering stage 18.131
SRR8316908Gold flowering stage 24.613
SRP132670SRR6706286Control23.128
SRR6706287Light intensity 50%23.587
SRR6706288Light intensity 20%22.857
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.052
CNS0095593Slightly white alabastrum(diploid) 26.217
CNS0095594Slightly white alabastrum(diploid) 34.948
CNS0095595Whole white alabastrum(diploid) 25.386
CNS0095596Whole white alabastrum(diploid) 35.229
CNS0095597Whole white alabastrum(diploid) 46.546
CNS0095598Silvery flower (diploied) 19.864
CNS0095599Silvery flower (diploied) 29.448
CNS0095600Silvery flower (diploied) 315.171
CNS0095601Golden flower (diploid) 17.560
CNS0095602Golden flower (diploid) 217.922
CNS0095603Golden flower (diploid) 317.040
CNS0095604Slightly white alabastrum(tetraploid) 18.360
CNS0095605Slightly white alabastrum(tetraploid) 27.376
CNS0095606Slightly white alabastrum(tetraploid) 318.249
CNS0095607Whole white alabastrum(tetraploid) 17.969
CNS0095608Whole white alabastrum(tetraploid) 26.162
CNS0095609Whole white alabastrum(tetraploid) 313.718
CNS0095610Silvery flower (tetraploid) 119.264
CNS0095611Silvery flower (tetraploid) 219.607
CNS0095612Silvery flower (tetraploid) 314.163
CNS0095613Golden flower (tetraploid) 18.736
CNS0095614Golden flower (tetraploid) 216.557
CNS0095615Golden flower (tetraploid) 314.883
CRA001975CRR073297Stem 117.173
CRR073298Stem 214.985
CRR073299Stem 317.547
CRR073300Leaf 119.515
CRR073301Leaf 216.872
CRR073302Leaf 313.226
CRR073303Juvenile bud 113.207
CRR073304Juvenile bud 29.184
CRR073305Juvenile bud 314.737
CRR073306Third green 14.804
CRR073307Third green 24.183
CRR073308Third green 36.588
CRR073309Second white 17.529
CRR073310Second white 26.775
CRR073311Second white 310.446
CRR073312Silver flowering 18.569
CRR073313Silver flowering 29.020
CRR073314Silver flowering 38.245
CRR073315Gold flowering 110.375
CRR073316Gold flowering 214.194
CRR073317Gold flowering 315.099
CRR073318Tawny withering 19.910
CRR073319Tawny withering 27.073
CRR073320Tawny withering 39.750