Detail information of GWHGAAZE022175


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002516952.11.3285E-122fumarylacetoacetate hydrolase, putative [Ricinus communis]
COGYP_184285.17E-562-hydroxyhepta-2,4-diene-1,7-dioate isomerase
trEMBLtr|B9RT83|B9RT83_RICCO5E-123Fumarylacetoacetate hydrolase, putative {ECO:0000313|EMBL:EEF45566.1}
TAIR10AT4G15940.12E-78Fumarylacetoacetate (FAA) hydrolase family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6801924168024354+
GWHAAZE00000006mRNA6801924168024354+
GWHAAZE00000006exon6801924168019447+
GWHAAZE00000006exon6801961568019780+
GWHAAZE00000006exon6802196268022014+
GWHAAZE00000006exon6802300668023068+
GWHAAZE00000006exon6802338668023503+
GWHAAZE00000006exon6802424268024354+
GWHAAZE00000006CDS6801924168019447+
GWHAAZE00000006CDS6801961568019780+
GWHAAZE00000006CDS6802196268022014+
GWHAAZE00000006CDS6802300668023068+
GWHAAZE00000006CDS6802338668023503+
GWHAAZE00000006CDS6802424268024354+
Transcript Sequence

Network for GWHGAAZE022175

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01557.19FAA_hydrolase482291.10E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01557FAHD1 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Tyrosine metabolismmap00350

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf47.511
SRR3591706second leaf29.573
SRR3591707mature leaf30.713
SRR3591708Shoot apex35.166
SRR3591709Stem40.130
SRR3591710White floral bud79.734
SRR3591711White flower77.073
SRR3591712Green floral bud49.557
SRR3591713Yellow flower70.102
SRP173429 SRR8316895Juvenile bud stage 31.593
SRR8316896Juvenile bud stage 46.647
SRR8316897Juvenile bud stage 15.261
SRR8316894Third green stage 18.537
SRR8316900Third green stage 67.401
SRR8316901Third green stage 65.396
SRR8316898Complete white stage 57.103
SRR8316899Complete white stage 80.751
SRR8316903Complete white stage 58.273
SRR8316902Silver flowering stage61.571
SRR8316904Silver flowering stage73.618
SRR8316905Silver flowering stage40.866
SRR8316906Gold flowering stage 131.208
SRR8316907Gold flowering stage 139.413
SRR8316908Gold flowering stage 97.666
SRP132670SRR6706286Control75.385
SRR6706287Light intensity 50%79.916
SRR6706288Light intensity 20%89.053
CNP0000432CNS0095592Slightly white alabastrum(diploid) 148.162
CNS0095593Slightly white alabastrum(diploid) 242.119
CNS0095594Slightly white alabastrum(diploid) 347.009
CNS0095595Whole white alabastrum(diploid) 242.952
CNS0095596Whole white alabastrum(diploid) 357.963
CNS0095597Whole white alabastrum(diploid) 442.785
CNS0095598Silvery flower (diploied) 141.601
CNS0095599Silvery flower (diploied) 246.047
CNS0095600Silvery flower (diploied) 387.464
CNS0095601Golden flower (diploid) 146.089
CNS0095602Golden flower (diploid) 254.768
CNS0095603Golden flower (diploid) 356.595
CNS0095604Slightly white alabastrum(tetraploid) 134.198
CNS0095605Slightly white alabastrum(tetraploid) 229.060
CNS0095606Slightly white alabastrum(tetraploid) 330.425
CNS0095607Whole white alabastrum(tetraploid) 123.484
CNS0095608Whole white alabastrum(tetraploid) 228.838
CNS0095609Whole white alabastrum(tetraploid) 338.812
CNS0095610Silvery flower (tetraploid) 134.271
CNS0095611Silvery flower (tetraploid) 252.163
CNS0095612Silvery flower (tetraploid) 360.656
CNS0095613Golden flower (tetraploid) 120.169
CNS0095614Golden flower (tetraploid) 230.888
CNS0095615Golden flower (tetraploid) 330.624
CRA001975CRR073297Stem 137.540
CRR073298Stem 237.559
CRR073299Stem 341.961
CRR073300Leaf 147.378
CRR073301Leaf 248.651
CRR073302Leaf 357.335
CRR073303Juvenile bud 177.422
CRR073304Juvenile bud 287.600
CRR073305Juvenile bud 345.544
CRR073306Third green 1115.169
CRR073307Third green 297.010
CRR073308Third green 396.726
CRR073309Second white 189.923
CRR073310Second white 290.588
CRR073311Second white 356.694
CRR073312Silver flowering 140.507
CRR073313Silver flowering 222.225
CRR073314Silver flowering 344.323
CRR073315Gold flowering 130.892
CRR073316Gold flowering 236.676
CRR073317Gold flowering 317.463
CRR073318Tawny withering 130.283
CRR073319Tawny withering 224.871
CRR073320Tawny withering 326.168