Detail information of GWHGAAZE022184


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAIL29213.10acyl-CoA dehydrogenase [Camellia oleifera]
COGYP_004863682.19E-169acyl-CoA dehydrogenase
Swissprottr|Q9FS88|MBCD_SOLTU6E-232-methylacyl-CoA dehydrogenase, mitochondrial (Precursor)
trEMBLtr|A0A077D632|A0A077D632_9ERIC0Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AIL29213.1}
TAIR10AT3G06810.10acyl-CoA dehydrogenase-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6812587068134336-
GWHAAZE00000006mRNA6812587068134336-
GWHAAZE00000006exon6812587068126061-
GWHAAZE00000006exon6812615268126256-
GWHAAZE00000006exon6812635268126504-
GWHAAZE00000006exon6812664968126858-
GWHAAZE00000006exon6812694568127029-
GWHAAZE00000006exon6812808868128230-
GWHAAZE00000006exon6812950568129699-
GWHAAZE00000006exon6812985268130117-
GWHAAZE00000006exon6813023368130470-
GWHAAZE00000006exon6813060268130700-
GWHAAZE00000006exon6813215968132278-
GWHAAZE00000006exon6813239268132469-
GWHAAZE00000006exon6813263468132819-
GWHAAZE00000006exon6813364068133771-
GWHAAZE00000006exon6813387768134017-
GWHAAZE00000006exon6813418468134336-
GWHAAZE00000006CDS6813418468134336-
GWHAAZE00000006CDS6813387768134017-
GWHAAZE00000006CDS6813364068133771-
GWHAAZE00000006CDS6813263468132819-
GWHAAZE00000006CDS6813239268132469-
GWHAAZE00000006CDS6813215968132278-
GWHAAZE00000006CDS6813060268130700-
GWHAAZE00000006CDS6813023368130470-
GWHAAZE00000006CDS6812985268130117-
GWHAAZE00000006CDS6812950568129699-
GWHAAZE00000006CDS6812808868128230-
GWHAAZE00000006CDS6812694568127029-
GWHAAZE00000006CDS6812664968126858-
GWHAAZE00000006CDS6812635268126504-
GWHAAZE00000006CDS6812615268126256-
GWHAAZE00000006CDS6812587068126061-
Transcript Sequence

Network for GWHGAAZE022184

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01636.24APH62301.60E-42
PF02771.17Acyl-CoA_dh_N4175572.20E-10
PF02770.20Acyl-CoA_dh_M5626631.80E-18
PF00441.25Acyl-CoA_dh_16758232.30E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00249ACADM, acd Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid degradationmap00071
Valine, leucine and isoleucine degradationmap00280
PPAR signaling pathwaymap03320

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
GO:0050660molecular_functionflavin adenine dinucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf45.419
SRR3591706second leaf23.715
SRR3591707mature leaf23.821
SRR3591708Shoot apex34.027
SRR3591709Stem48.589
SRR3591710White floral bud91.212
SRR3591711White flower120.294
SRR3591712Green floral bud43.764
SRR3591713Yellow flower120.865
SRP173429 SRR8316895Juvenile bud stage 39.329
SRR8316896Juvenile bud stage 65.819
SRR8316897Juvenile bud stage 27.172
SRR8316894Third green stage 28.658
SRR8316900Third green stage 91.836
SRR8316901Third green stage 78.239
SRR8316898Complete white stage 45.689
SRR8316899Complete white stage 95.845
SRR8316903Complete white stage 80.587
SRR8316902Silver flowering stage56.170
SRR8316904Silver flowering stage92.583
SRR8316905Silver flowering stage50.155
SRR8316906Gold flowering stage 144.738
SRR8316907Gold flowering stage 144.197
SRR8316908Gold flowering stage 173.922
SRP132670SRR6706286Control119.843
SRR6706287Light intensity 50%109.871
SRR6706288Light intensity 20%112.547
CNP0000432CNS0095592Slightly white alabastrum(diploid) 146.178
CNS0095593Slightly white alabastrum(diploid) 241.456
CNS0095594Slightly white alabastrum(diploid) 350.064
CNS0095595Whole white alabastrum(diploid) 242.062
CNS0095596Whole white alabastrum(diploid) 352.343
CNS0095597Whole white alabastrum(diploid) 449.709
CNS0095598Silvery flower (diploied) 171.520
CNS0095599Silvery flower (diploied) 270.734
CNS0095600Silvery flower (diploied) 3154.571
CNS0095601Golden flower (diploid) 170.715
CNS0095602Golden flower (diploid) 2140.965
CNS0095603Golden flower (diploid) 3139.222
CNS0095604Slightly white alabastrum(tetraploid) 133.801
CNS0095605Slightly white alabastrum(tetraploid) 229.902
CNS0095606Slightly white alabastrum(tetraploid) 359.038
CNS0095607Whole white alabastrum(tetraploid) 124.493
CNS0095608Whole white alabastrum(tetraploid) 224.198
CNS0095609Whole white alabastrum(tetraploid) 371.787
CNS0095610Silvery flower (tetraploid) 1162.281
CNS0095611Silvery flower (tetraploid) 2193.989
CNS0095612Silvery flower (tetraploid) 3227.763
CNS0095613Golden flower (tetraploid) 195.170
CNS0095614Golden flower (tetraploid) 2139.791
CNS0095615Golden flower (tetraploid) 3179.351
CRA001975CRR073297Stem 182.502
CRR073298Stem 284.861
CRR073299Stem 374.819
CRR073300Leaf 1103.156
CRR073301Leaf 295.444
CRR073302Leaf 392.993
CRR073303Juvenile bud 1101.705
CRR073304Juvenile bud 284.367
CRR073305Juvenile bud 3142.334
CRR073306Third green 1136.643
CRR073307Third green 294.429
CRR073308Third green 3116.253
CRR073309Second white 1158.751
CRR073310Second white 2127.742
CRR073311Second white 3139.672
CRR073312Silver flowering 1108.238
CRR073313Silver flowering 282.681
CRR073314Silver flowering 391.670
CRR073315Gold flowering 121.493
CRR073316Gold flowering 226.783
CRR073317Gold flowering 327.527
CRR073318Tawny withering 149.706
CRR073319Tawny withering 245.152
CRR073320Tawny withering 334.879