Detail information of GWHGAAZE022222


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002276853.10PREDICTED: dihydrolipoyl dehydrogenase 2, chloroplastic [Vitis vinifera]
COGYP_007124726.10dihydrolipoamide dehydrogenase
Swissprottr|A8MS68|PLPD1_ARATH0Dihydrolipoyl dehydrogenase 1, chloroplastic (Precursor)
trEMBLtr|D7SY46|D7SY46_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI22903.3}
TAIR10AT4G16155.10dihydrolipoyl dehydrogenases

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6884695168854298-
GWHAAZE00000006mRNA6884695168854298-
GWHAAZE00000006exon6885376768854298-
GWHAAZE00000006exon6885304068853186-
GWHAAZE00000006exon6885248268852616-
GWHAAZE00000006exon6885216968852306-
GWHAAZE00000006exon6885198868852093-
GWHAAZE00000006exon6885069368850817-
GWHAAZE00000006exon6885003268850157-
GWHAAZE00000006exon6884987768849957-
GWHAAZE00000006exon6884902568849087-
GWHAAZE00000006exon6884869268848766-
GWHAAZE00000006exon6884853168848609-
GWHAAZE00000006exon6884835868848458-
GWHAAZE00000006exon6884817068848283-
GWHAAZE00000006exon6884768868847801-
GWHAAZE00000006exon6884695168847043-
GWHAAZE00000006five_prime_UTR6885410668854298-
GWHAAZE00000006CDS6885376768854105-
GWHAAZE00000006CDS6885304068853186-
GWHAAZE00000006CDS6885248268852616-
GWHAAZE00000006CDS6885216968852306-
GWHAAZE00000006CDS6885198868852093-
GWHAAZE00000006CDS6885069368850817-
GWHAAZE00000006CDS6885003268850157-
GWHAAZE00000006CDS6884987768849957-
GWHAAZE00000006CDS6884902568849087-
GWHAAZE00000006CDS6884869268848766-
GWHAAZE00000006CDS6884853168848609-
GWHAAZE00000006CDS6884835868848458-
GWHAAZE00000006CDS6884817068848283-
GWHAAZE00000006CDS6884768868847801-
GWHAAZE00000006CDS6884695168847043-
Transcript Sequence

Network for GWHGAAZE022222

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.15Pyr_redox_2924692.80E-56
PF02852.23Pyr_redox_dim4885993.50E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00382DLD, lpd, pdhD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cyclemap00020
Pyruvate metabolismmap00620
Glyoxylate and dicarboxylate metabolismmap00630
Propanoate metabolismmap00640
Glycine, serine and threonine metabolismmap00260
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0045454biological_processcell redox homeostasis
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0009055molecular_functionelectron transfer activity
GO:0016668molecular_functionoxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.104
SRR3591706second leaf34.360
SRR3591707mature leaf25.101
SRR3591708Shoot apex20.846
SRR3591709Stem11.179
SRR3591710White floral bud25.412
SRR3591711White flower25.323
SRR3591712Green floral bud25.385
SRR3591713Yellow flower35.437
SRP173429 SRR8316895Juvenile bud stage 18.647
SRR8316896Juvenile bud stage 24.691
SRR8316897Juvenile bud stage 11.995
SRR8316894Third green stage 11.161
SRR8316900Third green stage 31.363
SRR8316901Third green stage 24.309
SRR8316898Complete white stage 10.082
SRR8316899Complete white stage 24.731
SRR8316903Complete white stage 17.676
SRR8316902Silver flowering stage10.969
SRR8316904Silver flowering stage16.047
SRR8316905Silver flowering stage8.293
SRR8316906Gold flowering stage 24.768
SRR8316907Gold flowering stage 23.362
SRR8316908Gold flowering stage 23.964
SRP132670SRR6706286Control30.060
SRR6706287Light intensity 50%31.347
SRR6706288Light intensity 20%34.299
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.769
CNS0095593Slightly white alabastrum(diploid) 215.091
CNS0095594Slightly white alabastrum(diploid) 313.091
CNS0095595Whole white alabastrum(diploid) 218.098
CNS0095596Whole white alabastrum(diploid) 316.550
CNS0095597Whole white alabastrum(diploid) 417.173
CNS0095598Silvery flower (diploied) 123.515
CNS0095599Silvery flower (diploied) 218.210
CNS0095600Silvery flower (diploied) 325.634
CNS0095601Golden flower (diploid) 117.619
CNS0095602Golden flower (diploid) 222.250
CNS0095603Golden flower (diploid) 322.994
CNS0095604Slightly white alabastrum(tetraploid) 123.534
CNS0095605Slightly white alabastrum(tetraploid) 220.468
CNS0095606Slightly white alabastrum(tetraploid) 334.476
CNS0095607Whole white alabastrum(tetraploid) 114.292
CNS0095608Whole white alabastrum(tetraploid) 215.467
CNS0095609Whole white alabastrum(tetraploid) 333.398
CNS0095610Silvery flower (tetraploid) 134.516
CNS0095611Silvery flower (tetraploid) 239.904
CNS0095612Silvery flower (tetraploid) 347.177
CNS0095613Golden flower (tetraploid) 123.019
CNS0095614Golden flower (tetraploid) 229.873
CNS0095615Golden flower (tetraploid) 333.997
CRA001975CRR073297Stem 136.170
CRR073298Stem 234.200
CRR073299Stem 327.765
CRR073300Leaf 134.592
CRR073301Leaf 236.568
CRR073302Leaf 326.604
CRR073303Juvenile bud 127.506
CRR073304Juvenile bud 220.518
CRR073305Juvenile bud 326.363
CRR073306Third green 116.250
CRR073307Third green 210.359
CRR073308Third green 313.915
CRR073309Second white 113.714
CRR073310Second white 217.767
CRR073311Second white 316.026
CRR073312Silver flowering 115.253
CRR073313Silver flowering 214.395
CRR073314Silver flowering 314.987
CRR073315Gold flowering 122.192
CRR073316Gold flowering 237.572
CRR073317Gold flowering 318.024
CRR073318Tawny withering 113.250
CRR073319Tawny withering 29.384
CRR073320Tawny withering 313.825