Detail information of GWHGAAZE022234


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008223347.19.1387E-162PREDICTED: ubiquitin-conjugating enzyme E2 32 [Prunus mume]
Swissprottr|Q9LSP7|UBC32_ARATH3E-136Ubiquitin-conjugating enzyme E2 32
trEMBLtr|M5XYN2|M5XYN2_PRUPE3E-161Uncharacterized protein {ECO:0000313|EMBL:EMJ26953.1}
TAIR10AT3G17000.16E-103ubiquitin-conjugating enzyme 32

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6898412168987583+
GWHAAZE00000006mRNA6898412168987583+
GWHAAZE00000006exon6898412168984231+
GWHAAZE00000006exon6898604168986172+
GWHAAZE00000006exon6898630568986389+
GWHAAZE00000006exon6898678668986949+
GWHAAZE00000006exon6898717968987583+
GWHAAZE00000006CDS6898412168984231+
GWHAAZE00000006CDS6898604168986172+
GWHAAZE00000006CDS6898630568986389+
GWHAAZE00000006CDS6898678668986949+
GWHAAZE00000006CDS6898717968987583+
Transcript Sequence

Network for GWHGAAZE022234

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con151262.50E-20
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10578UBE2J1, NCUBE1, UBC6 Protein processing in endoplasmic reticulum map04141
Ubiquitin mediated proteolysismap04120

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf223.794
SRR3591706second leaf106.931
SRR3591707mature leaf193.723
SRR3591708Shoot apex87.422
SRR3591709Stem217.150
SRR3591710White floral bud224.275
SRR3591711White flower220.762
SRR3591712Green floral bud180.433
SRR3591713Yellow flower220.149
SRP173429 SRR8316895Juvenile bud stage 110.185
SRR8316896Juvenile bud stage 129.985
SRR8316897Juvenile bud stage 76.090
SRR8316894Third green stage 48.322
SRR8316900Third green stage 165.165
SRR8316901Third green stage 170.254
SRR8316898Complete white stage 108.792
SRR8316899Complete white stage 289.195
SRR8316903Complete white stage 135.576
SRR8316902Silver flowering stage106.879
SRR8316904Silver flowering stage120.355
SRR8316905Silver flowering stage67.696
SRR8316906Gold flowering stage 199.828
SRR8316907Gold flowering stage 174.469
SRR8316908Gold flowering stage 182.868
SRP132670SRR6706286Control175.415
SRR6706287Light intensity 50%178.571
SRR6706288Light intensity 20%206.322
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1105.180
CNS0095593Slightly white alabastrum(diploid) 2129.859
CNS0095594Slightly white alabastrum(diploid) 3103.530
CNS0095595Whole white alabastrum(diploid) 2108.582
CNS0095596Whole white alabastrum(diploid) 397.404
CNS0095597Whole white alabastrum(diploid) 4104.038
CNS0095598Silvery flower (diploied) 1123.931
CNS0095599Silvery flower (diploied) 2132.191
CNS0095600Silvery flower (diploied) 3227.970
CNS0095601Golden flower (diploid) 1151.515
CNS0095602Golden flower (diploid) 2225.876
CNS0095603Golden flower (diploid) 3222.823
CNS0095604Slightly white alabastrum(tetraploid) 190.277
CNS0095605Slightly white alabastrum(tetraploid) 281.525
CNS0095606Slightly white alabastrum(tetraploid) 3128.662
CNS0095607Whole white alabastrum(tetraploid) 186.254
CNS0095608Whole white alabastrum(tetraploid) 281.322
CNS0095609Whole white alabastrum(tetraploid) 3158.201
CNS0095610Silvery flower (tetraploid) 1210.377
CNS0095611Silvery flower (tetraploid) 2224.975
CNS0095612Silvery flower (tetraploid) 3137.824
CNS0095613Golden flower (tetraploid) 1151.823
CNS0095614Golden flower (tetraploid) 2200.756
CNS0095615Golden flower (tetraploid) 3202.569
CRA001975CRR073297Stem 1113.135
CRR073298Stem 2101.697
CRR073299Stem 3124.235
CRR073300Leaf 1118.489
CRR073301Leaf 2134.799
CRR073302Leaf 3137.134
CRR073303Juvenile bud 1146.116
CRR073304Juvenile bud 2144.087
CRR073305Juvenile bud 3156.200
CRR073306Third green 1140.406
CRR073307Third green 2126.022
CRR073308Third green 3121.764
CRR073309Second white 1130.243
CRR073310Second white 297.182
CRR073311Second white 376.945
CRR073312Silver flowering 1102.139
CRR073313Silver flowering 2108.363
CRR073314Silver flowering 391.585
CRR073315Gold flowering 1151.695
CRR073316Gold flowering 2166.871
CRR073317Gold flowering 3166.984
CRR073318Tawny withering 1138.042
CRR073319Tawny withering 2114.237
CRR073320Tawny withering 3139.148