Detail information of GWHGAAZE022274


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002519286.10dihydrolipoamide dehydrogenase, putative [Ricinus communis]
COGYP_001601674.102-oxoglutarate dehydrogenase E3 component
Swissprottr|Q9M5K3|DLDH1_ARATH0Dihydrolipoyl dehydrogenase 1, mitochondrial (Precursor)
trEMBLtr|B9RZW7|B9RZW7_RICCO0Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}
TAIR10AT1G48030.20mitochondrial lipoamide dehydrogenase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6969561969698454-
GWHAAZE00000006mRNA6969561969698454-
GWHAAZE00000006exon6969561969696869-
GWHAAZE00000006exon6969817069698454-
GWHAAZE00000006CDS6969817069698454-
GWHAAZE00000006CDS6969561969696869-
Transcript Sequence

Network for GWHGAAZE022274

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.15Pyr_redox_2493734.40E-71
PF02852.23Pyr_redox_dim3925013.00E-40
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00382DLD, lpd, pdhD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cyclemap00020
Pyruvate metabolismmap00620
Glyoxylate and dicarboxylate metabolismmap00630
Propanoate metabolismmap00640
Glycine, serine and threonine metabolismmap00260
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0045454biological_processcell redox homeostasis
GO:0055114biological_processoxidation-reduction process
GO:0004148molecular_functiondihydrolipoyl dehydrogenase activity
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0009055molecular_functionelectron transfer activity
GO:0016491molecular_functionoxidoreductase activity
GO:0016668molecular_functionoxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf129.286
SRR3591706second leaf208.535
SRR3591707mature leaf191.282
SRR3591708Shoot apex104.634
SRR3591709Stem104.912
SRR3591710White floral bud90.770
SRR3591711White flower104.942
SRR3591712Green floral bud118.775
SRR3591713Yellow flower102.886
SRP173429 SRR8316895Juvenile bud stage 89.581
SRR8316896Juvenile bud stage 130.506
SRR8316897Juvenile bud stage 56.824
SRR8316894Third green stage 52.329
SRR8316900Third green stage 182.747
SRR8316901Third green stage 176.063
SRR8316898Complete white stage 64.689
SRR8316899Complete white stage 139.478
SRR8316903Complete white stage 93.951
SRR8316902Silver flowering stage84.874
SRR8316904Silver flowering stage89.764
SRR8316905Silver flowering stage48.632
SRR8316906Gold flowering stage 178.319
SRR8316907Gold flowering stage 186.353
SRR8316908Gold flowering stage 235.459
SRP132670SRR6706286Control151.454
SRR6706287Light intensity 50%146.269
SRR6706288Light intensity 20%149.482
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1103.099
CNS0095593Slightly white alabastrum(diploid) 2103.616
CNS0095594Slightly white alabastrum(diploid) 3103.194
CNS0095595Whole white alabastrum(diploid) 2106.625
CNS0095596Whole white alabastrum(diploid) 3115.939
CNS0095597Whole white alabastrum(diploid) 499.359
CNS0095598Silvery flower (diploied) 191.308
CNS0095599Silvery flower (diploied) 284.255
CNS0095600Silvery flower (diploied) 3166.515
CNS0095601Golden flower (diploid) 177.906
CNS0095602Golden flower (diploid) 2150.714
CNS0095603Golden flower (diploid) 3147.762
CNS0095604Slightly white alabastrum(tetraploid) 1134.468
CNS0095605Slightly white alabastrum(tetraploid) 2123.285
CNS0095606Slightly white alabastrum(tetraploid) 3116.749
CNS0095607Whole white alabastrum(tetraploid) 1127.277
CNS0095608Whole white alabastrum(tetraploid) 2135.869
CNS0095609Whole white alabastrum(tetraploid) 3161.128
CNS0095610Silvery flower (tetraploid) 1171.228
CNS0095611Silvery flower (tetraploid) 2156.679
CNS0095612Silvery flower (tetraploid) 3155.359
CNS0095613Golden flower (tetraploid) 1110.569
CNS0095614Golden flower (tetraploid) 2156.713
CNS0095615Golden flower (tetraploid) 3156.112
CRA001975CRR073297Stem 1124.293
CRR073298Stem 2120.223
CRR073299Stem 3162.655
CRR073300Leaf 1137.206
CRR073301Leaf 2139.510
CRR073302Leaf 3164.010
CRR073303Juvenile bud 1195.171
CRR073304Juvenile bud 2196.700
CRR073305Juvenile bud 3189.253
CRR073306Third green 1195.566
CRR073307Third green 2178.000
CRR073308Third green 3166.517
CRR073309Second white 1286.745
CRR073310Second white 2176.762
CRR073311Second white 3158.123
CRR073312Silver flowering 1179.261
CRR073313Silver flowering 2237.237
CRR073314Silver flowering 3174.099
CRR073315Gold flowering 1279.003
CRR073316Gold flowering 2317.950
CRR073317Gold flowering 3410.321
CRR073318Tawny withering 1129.733
CRR073319Tawny withering 2103.552
CRR073320Tawny withering 3126.718