Detail information of GWHGAAZE022325


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007223086.10hypothetical protein PRUPE_ppa007000mg [Prunus persica]
COGYP_003684082.16E-10Kelch repeat-containing protein
Swissprottr|Q0WW40|FBK5_ARATH3E-173F-box/kelch-repeat protein At1g16250
trEMBLtr|M5XYF3|M5XYF3_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ24285.1}
TAIR10AT1G16250.19E-77Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7049740370500575-
GWHAAZE00000006mRNA7049740370500575-
GWHAAZE00000006exon7050056270500575-
GWHAAZE00000006exon7049964770500242-
GWHAAZE00000006exon7049933970499398-
GWHAAZE00000006exon7049890770498994-
GWHAAZE00000006exon7049765870498243-
GWHAAZE00000006exon7049740370497456-
GWHAAZE00000006CDS7050056270500575-
GWHAAZE00000006CDS7049964770500242-
GWHAAZE00000006CDS7049933970499398-
GWHAAZE00000006CDS7049890770498994-
GWHAAZE00000006CDS7049765870498243-
GWHAAZE00000006CDS7049740370497456-
Transcript Sequence

Network for GWHGAAZE022325

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07646.16Kelch_21021540.00014
PF01344.26Kelch_11581972.20E-07
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf42.364
SRR3591706second leaf13.776
SRR3591707mature leaf10.166
SRR3591708Shoot apex18.831
SRR3591709Stem27.352
SRR3591710White floral bud22.664
SRR3591711White flower19.435
SRR3591712Green floral bud14.486
SRR3591713Yellow flower13.819
SRP173429 SRR8316895Juvenile bud stage 16.175
SRR8316896Juvenile bud stage 23.502
SRR8316897Juvenile bud stage 16.934
SRR8316894Third green stage 6.366
SRR8316900Third green stage 14.188
SRR8316901Third green stage 17.941
SRR8316898Complete white stage 7.308
SRR8316899Complete white stage 23.694
SRR8316903Complete white stage 13.644
SRR8316902Silver flowering stage7.764
SRR8316904Silver flowering stage10.306
SRR8316905Silver flowering stage5.902
SRR8316906Gold flowering stage 18.361
SRR8316907Gold flowering stage 16.564
SRR8316908Gold flowering stage 14.563
SRP132670SRR6706286Control21.505
SRR6706287Light intensity 50%26.294
SRR6706288Light intensity 20%26.208
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.481
CNS0095593Slightly white alabastrum(diploid) 213.109
CNS0095594Slightly white alabastrum(diploid) 311.922
CNS0095595Whole white alabastrum(diploid) 29.640
CNS0095596Whole white alabastrum(diploid) 35.462
CNS0095597Whole white alabastrum(diploid) 49.451
CNS0095598Silvery flower (diploied) 116.404
CNS0095599Silvery flower (diploied) 215.505
CNS0095600Silvery flower (diploied) 316.847
CNS0095601Golden flower (diploid) 116.816
CNS0095602Golden flower (diploid) 217.340
CNS0095603Golden flower (diploid) 316.738
CNS0095604Slightly white alabastrum(tetraploid) 111.143
CNS0095605Slightly white alabastrum(tetraploid) 210.668
CNS0095606Slightly white alabastrum(tetraploid) 322.239
CNS0095607Whole white alabastrum(tetraploid) 19.176
CNS0095608Whole white alabastrum(tetraploid) 26.317
CNS0095609Whole white alabastrum(tetraploid) 312.209
CNS0095610Silvery flower (tetraploid) 117.695
CNS0095611Silvery flower (tetraploid) 213.246
CNS0095612Silvery flower (tetraploid) 320.351
CNS0095613Golden flower (tetraploid) 112.043
CNS0095614Golden flower (tetraploid) 214.884
CNS0095615Golden flower (tetraploid) 310.728
CRA001975CRR073297Stem 119.495
CRR073298Stem 218.910
CRR073299Stem 311.346
CRR073300Leaf 120.190
CRR073301Leaf 223.169
CRR073302Leaf 312.283
CRR073303Juvenile bud 114.300
CRR073304Juvenile bud 29.042
CRR073305Juvenile bud 39.667
CRR073306Third green 16.844
CRR073307Third green 25.051
CRR073308Third green 36.846
CRR073309Second white 15.579
CRR073310Second white 26.904
CRR073311Second white 36.209
CRR073312Silver flowering 13.146
CRR073313Silver flowering 23.953
CRR073314Silver flowering 34.456
CRR073315Gold flowering 14.649
CRR073316Gold flowering 26.711
CRR073317Gold flowering 33.969
CRR073318Tawny withering 119.608
CRR073319Tawny withering 216.360
CRR073320Tawny withering 317.164