Detail information of GWHGAAZE022347


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI17660.33.10481E-60unnamed protein product [Vitis vinifera]
Swissprottr|Q9FTA0|GEML4_ARATH8E-50GEM-like protein 4
trEMBLtr|D7SPT1|D7SPT1_VITVI1E-60Putative uncharacterized protein {ECO:0000313|EMBL:CBI17660.3}
TAIR10AT5G08350.16E-41GRAM domain-containing protein / ABA-responsive protein-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7083852870839488+
GWHAAZE00000006mRNA7083852870839488+
GWHAAZE00000006exon7083852870838693+
GWHAAZE00000006exon7083905470839328+
GWHAAZE00000006exon7083942070839488+
GWHAAZE00000006CDS7083852870838693+
GWHAAZE00000006CDS7083905470839328+
GWHAAZE00000006CDS7083942070839488+
Transcript Sequence

Network for GWHGAAZE022347

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0100


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02893.21GRAM841688.50E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.694
SRR3591706second leaf0.194
SRR3591707mature leaf0.000
SRR3591708Shoot apex5.729
SRR3591709Stem6.041
SRR3591710White floral bud33.116
SRR3591711White flower9.148
SRR3591712Green floral bud3.538
SRR3591713Yellow flower8.685
SRP173429 SRR8316895Juvenile bud stage 0.134
SRR8316896Juvenile bud stage 0.174
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.485
SRR8316900Third green stage 2.309
SRR8316901Third green stage 3.499
SRR8316898Complete white stage 40.894
SRR8316899Complete white stage 18.979
SRR8316903Complete white stage 70.679
SRR8316902Silver flowering stage16.924
SRR8316904Silver flowering stage14.225
SRR8316905Silver flowering stage0.236
SRR8316906Gold flowering stage 1.453
SRR8316907Gold flowering stage 4.227
SRR8316908Gold flowering stage 0.148
SRP132670SRR6706286Control7.874
SRR6706287Light intensity 50%8.518
SRR6706288Light intensity 20%3.978
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.138
CNS0095593Slightly white alabastrum(diploid) 22.920
CNS0095594Slightly white alabastrum(diploid) 32.384
CNS0095595Whole white alabastrum(diploid) 21.863
CNS0095596Whole white alabastrum(diploid) 31.011
CNS0095597Whole white alabastrum(diploid) 40.838
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.154
CNS0095600Silvery flower (diploied) 33.381
CNS0095601Golden flower (diploid) 10.667
CNS0095602Golden flower (diploid) 22.854
CNS0095603Golden flower (diploid) 34.445
CNS0095604Slightly white alabastrum(tetraploid) 10.671
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 31.100
CNS0095607Whole white alabastrum(tetraploid) 10.528
CNS0095608Whole white alabastrum(tetraploid) 20.575
CNS0095609Whole white alabastrum(tetraploid) 30.277
CNS0095610Silvery flower (tetraploid) 10.934
CNS0095611Silvery flower (tetraploid) 20.240
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.262
CNS0095614Golden flower (tetraploid) 20.050
CNS0095615Golden flower (tetraploid) 36.881
CRA001975CRR073297Stem 11.123
CRR073298Stem 21.043
CRR073299Stem 30.427
CRR073300Leaf 11.726
CRR073301Leaf 21.585
CRR073302Leaf 30.340
CRR073303Juvenile bud 10.677
CRR073304Juvenile bud 27.494
CRR073305Juvenile bud 32.430
CRR073306Third green 11.249
CRR073307Third green 27.331
CRR073308Third green 34.433
CRR073309Second white 10.573
CRR073310Second white 20.444
CRR073311Second white 30.000
CRR073312Silver flowering 10.011
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.605