Detail information of GWHGAAZE022382


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010249637.12.4612E-102PREDICTED: transcription factor TCP7 [Nelumbo nucifera]
Swissprottr|Q9FMX2|TCP7_ARATH2E-80Transcription factor TCP7
trEMBLtr|F6HIN5|F6HIN5_VITVI8E-102Putative uncharacterized protein {ECO:0000313|EMBL:CCB52081.1}
TAIR10AT5G23280.12E-52TCP family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7167910971680115-
GWHAAZE00000006mRNA7167910971680115-
GWHAAZE00000006exon7167972971680115-
GWHAAZE00000006exon7167910971679612-
GWHAAZE00000006five_prime_UTR7167998171680115-
GWHAAZE00000006CDS7167972971679980-
GWHAAZE00000006CDS7167910971679612-
Transcript Sequence

Network for GWHGAAZE022382

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0128


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP381225.10E-32
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
K16221TCP21, CHE Circadian rhythm - plant map04712

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf33.287
SRR3591706second leaf20.177
SRR3591707mature leaf9.996
SRR3591708Shoot apex92.512
SRR3591709Stem19.998
SRR3591710White floral bud24.859
SRR3591711White flower29.175
SRR3591712Green floral bud11.613
SRR3591713Yellow flower7.014
SRP173429 SRR8316895Juvenile bud stage 58.095
SRR8316896Juvenile bud stage 25.858
SRR8316897Juvenile bud stage 15.239
SRR8316894Third green stage 9.761
SRR8316900Third green stage 9.434
SRR8316901Third green stage 9.790
SRR8316898Complete white stage 2.280
SRR8316899Complete white stage 53.238
SRR8316903Complete white stage 11.540
SRR8316902Silver flowering stage2.790
SRR8316904Silver flowering stage2.954
SRR8316905Silver flowering stage1.637
SRR8316906Gold flowering stage 8.010
SRR8316907Gold flowering stage 9.241
SRR8316908Gold flowering stage 14.509
SRP132670SRR6706286Control21.205
SRR6706287Light intensity 50%21.942
SRR6706288Light intensity 20%21.334
CNP0000432CNS0095592Slightly white alabastrum(diploid) 130.725
CNS0095593Slightly white alabastrum(diploid) 238.802
CNS0095594Slightly white alabastrum(diploid) 324.029
CNS0095595Whole white alabastrum(diploid) 236.639
CNS0095596Whole white alabastrum(diploid) 32.019
CNS0095597Whole white alabastrum(diploid) 417.560
CNS0095598Silvery flower (diploied) 1109.659
CNS0095599Silvery flower (diploied) 278.274
CNS0095600Silvery flower (diploied) 333.120
CNS0095601Golden flower (diploid) 176.740
CNS0095602Golden flower (diploid) 274.621
CNS0095603Golden flower (diploid) 377.222
CNS0095604Slightly white alabastrum(tetraploid) 130.942
CNS0095605Slightly white alabastrum(tetraploid) 219.866
CNS0095606Slightly white alabastrum(tetraploid) 376.554
CNS0095607Whole white alabastrum(tetraploid) 125.700
CNS0095608Whole white alabastrum(tetraploid) 22.968
CNS0095609Whole white alabastrum(tetraploid) 310.072
CNS0095610Silvery flower (tetraploid) 19.638
CNS0095611Silvery flower (tetraploid) 225.339
CNS0095612Silvery flower (tetraploid) 314.990
CNS0095613Golden flower (tetraploid) 16.008
CNS0095614Golden flower (tetraploid) 211.932
CNS0095615Golden flower (tetraploid) 33.095
CRA001975CRR073297Stem 154.874
CRR073298Stem 243.718
CRR073299Stem 395.565
CRR073300Leaf 113.183
CRR073301Leaf 219.483
CRR073302Leaf 312.235
CRR073303Juvenile bud 111.498
CRR073304Juvenile bud 24.414
CRR073305Juvenile bud 322.073
CRR073306Third green 19.583
CRR073307Third green 27.697
CRR073308Third green 39.463
CRR073309Second white 18.818
CRR073310Second white 25.171
CRR073311Second white 33.252
CRR073312Silver flowering 13.044
CRR073313Silver flowering 27.536
CRR073314Silver flowering 32.895
CRR073315Gold flowering 129.570
CRR073316Gold flowering 236.192
CRR073317Gold flowering 343.576
CRR073318Tawny withering 160.040
CRR073319Tawny withering 245.795
CRR073320Tawny withering 355.017