Detail information of GWHGAAZE022394


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277006.10PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
COGYP_005368415.18E-28cytochrome P450
Swissprottr|Q9FMY1|C86B1_ARATH0Cytochrome P450 86B1
trEMBLtr|F6HF53|F6HF53_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB50993.1}
TAIR10AT5G23190.10cytochrome P450, family 86, subfamily B, polypeptide 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7178578271787904-
GWHAAZE00000006mRNA7178578271787904-
GWHAAZE00000006exon7178666071787904-
GWHAAZE00000006exon7178605671786185-
GWHAAZE00000006exon7178578271785975-
GWHAAZE00000006CDS7178666071787904-
GWHAAZE00000006CDS7178605671786185-
GWHAAZE00000006CDS7178578271785975-
Transcript Sequence

Network for GWHGAAZE022394

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p4501034492.00E-53
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15402CYP86B1 Cutin, suberine and wax biosynthesis map00073

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE022394.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 305101520253035404550Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.156
SRR3591708Shoot apex0.090
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.320
SRR3591712Green floral bud0.063
SRR3591713Yellow flower0.400
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.543
SRR8316897Juvenile bud stage 0.159
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.594
SRR8316901Third green stage 0.288
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.115
SRR8316903Complete white stage 0.038
SRR8316902Silver flowering stage0.982
SRR8316904Silver flowering stage1.217
SRR8316905Silver flowering stage0.029
SRR8316906Gold flowering stage 0.198
SRR8316907Gold flowering stage 0.070
SRR8316908Gold flowering stage 1.930
SRP132670SRR6706286Control0.513
SRR6706287Light intensity 50%0.557
SRR6706288Light intensity 20%0.382
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.002
CNS0095593Slightly white alabastrum(diploid) 20.238
CNS0095594Slightly white alabastrum(diploid) 30.637
CNS0095595Whole white alabastrum(diploid) 20.054
CNS0095596Whole white alabastrum(diploid) 30.030
CNS0095597Whole white alabastrum(diploid) 40.112
CNS0095598Silvery flower (diploied) 10.175
CNS0095599Silvery flower (diploied) 20.605
CNS0095600Silvery flower (diploied) 30.193
CNS0095601Golden flower (diploid) 10.088
CNS0095602Golden flower (diploid) 20.239
CNS0095603Golden flower (diploid) 30.190
CNS0095604Slightly white alabastrum(tetraploid) 10.046
CNS0095605Slightly white alabastrum(tetraploid) 20.107
CNS0095606Slightly white alabastrum(tetraploid) 30.042
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.201
CNS0095609Whole white alabastrum(tetraploid) 30.679
CNS0095610Silvery flower (tetraploid) 10.682
CNS0095611Silvery flower (tetraploid) 20.101
CNS0095612Silvery flower (tetraploid) 30.253
CNS0095613Golden flower (tetraploid) 10.044
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.035
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.000
CRR073299Stem 30.065
CRR073300Leaf 10.109
CRR073301Leaf 20.063
CRR073302Leaf 30.044
CRR073303Juvenile bud 10.297
CRR073304Juvenile bud 21.992
CRR073305Juvenile bud 30.153
CRR073306Third green 10.027
CRR073307Third green 20.033
CRR073308Third green 30.464
CRR073309Second white 10.051
CRR073310Second white 20.048
CRR073311Second white 30.044
CRR073312Silver flowering 10.158
CRR073313Silver flowering 20.772
CRR073314Silver flowering 30.834
CRR073315Gold flowering 10.056
CRR073316Gold flowering 20.300
CRR073317Gold flowering 30.482
CRR073318Tawny withering 132.155
CRR073319Tawny withering 27.308
CRR073320Tawny withering 345.522