Detail information of GWHGAAZE022415


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007214384.10hypothetical protein PRUPE_ppb001660mg [Prunus persica]
COGYP_003338481.10.0000006serine/threonine protein kinase
Swissprottr|O81832|Y4729_ARATH3E-164G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (Precursor)
trEMBLtr|M1BP27|M1BP27_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400049628}
TAIR10AT4G27290.13E-124S-locus lectin protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7219183972198546-
GWHAAZE00000006mRNA7219183972198546-
GWHAAZE00000006exon7219841172198546-
GWHAAZE00000006exon7219451472195806-
GWHAAZE00000006exon7219409472194193-
GWHAAZE00000006exon7219373372193916-
GWHAAZE00000006exon7219298172193020-
GWHAAZE00000006exon7219267972192775-
GWHAAZE00000006exon7219223272192382-
GWHAAZE00000006exon7219183972192141-
GWHAAZE00000006CDS7219841172198546-
GWHAAZE00000006CDS7219451472195806-
GWHAAZE00000006CDS7219409472194193-
GWHAAZE00000006CDS7219373372193916-
GWHAAZE00000006CDS7219298172193020-
GWHAAZE00000006CDS7219267972192775-
GWHAAZE00000006CDS7219223272192382-
GWHAAZE00000006CDS7219183972192141-
Transcript Sequence

Network for GWHGAAZE022415

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01453.25B_lectin1262271.40E-35
PF00954.21S_locus_glycop2613697.50E-29
PF08276.12PAN_23914575.60E-19
PF07714.18PK_Tyr_Ser-Thr5896533.30E-11
PF11883.9DUF34037257671.00E-09
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_DLSV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0048544biological_processrecognition of pollen
GO:0006468biological_processprotein phosphorylation
GO:0004674molecular_functionprotein serine/threonine kinase activity
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.018
SRR3591706second leaf1.481
SRR3591707mature leaf2.152
SRR3591708Shoot apex1.405
SRR3591709Stem1.885
SRR3591710White floral bud1.209
SRR3591711White flower1.385
SRR3591712Green floral bud0.828
SRR3591713Yellow flower0.992
SRP173429 SRR8316895Juvenile bud stage 0.576
SRR8316896Juvenile bud stage 0.695
SRR8316897Juvenile bud stage 0.223
SRR8316894Third green stage 0.226
SRR8316900Third green stage 0.421
SRR8316901Third green stage 0.341
SRR8316898Complete white stage 0.138
SRR8316899Complete white stage 0.426
SRR8316903Complete white stage 0.417
SRR8316902Silver flowering stage0.187
SRR8316904Silver flowering stage0.455
SRR8316905Silver flowering stage0.051
SRR8316906Gold flowering stage 0.785
SRR8316907Gold flowering stage 0.476
SRR8316908Gold flowering stage 0.651
SRP132670SRR6706286Control0.444
SRR6706287Light intensity 50%0.295
SRR6706288Light intensity 20%0.302
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.677
CNS0095593Slightly white alabastrum(diploid) 20.175
CNS0095594Slightly white alabastrum(diploid) 30.707
CNS0095595Whole white alabastrum(diploid) 20.529
CNS0095596Whole white alabastrum(diploid) 30.208
CNS0095597Whole white alabastrum(diploid) 40.193
CNS0095598Silvery flower (diploied) 10.811
CNS0095599Silvery flower (diploied) 21.070
CNS0095600Silvery flower (diploied) 30.593
CNS0095601Golden flower (diploid) 10.689
CNS0095602Golden flower (diploid) 20.443
CNS0095603Golden flower (diploid) 30.769
CNS0095604Slightly white alabastrum(tetraploid) 10.476
CNS0095605Slightly white alabastrum(tetraploid) 20.107
CNS0095606Slightly white alabastrum(tetraploid) 30.659
CNS0095607Whole white alabastrum(tetraploid) 10.443
CNS0095608Whole white alabastrum(tetraploid) 20.180
CNS0095609Whole white alabastrum(tetraploid) 30.387
CNS0095610Silvery flower (tetraploid) 10.531
CNS0095611Silvery flower (tetraploid) 20.454
CNS0095612Silvery flower (tetraploid) 30.264
CNS0095613Golden flower (tetraploid) 10.803
CNS0095614Golden flower (tetraploid) 20.695
CNS0095615Golden flower (tetraploid) 30.164
CRA001975CRR073297Stem 10.281
CRR073298Stem 20.323
CRR073299Stem 30.161
CRR073300Leaf 10.321
CRR073301Leaf 20.259
CRR073302Leaf 30.258
CRR073303Juvenile bud 10.125
CRR073304Juvenile bud 20.027
CRR073305Juvenile bud 30.114
CRR073306Third green 10.006
CRR073307Third green 20.001
CRR073308Third green 30.011
CRR073309Second white 10.121
CRR073310Second white 20.022
CRR073311Second white 30.057
CRR073312Silver flowering 10.052
CRR073313Silver flowering 20.002
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.279
CRR073316Gold flowering 22.912
CRR073317Gold flowering 31.941
CRR073318Tawny withering 11.082
CRR073319Tawny withering 20.731
CRR073320Tawny withering 30.182