Detail information of GWHGAAZE022642


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKGN44891.15.4042E-164hypothetical protein Csa_7G394600 [Cucumis sativus]
trEMBLtr|A0A0A0KAR3|A0A0A0KAR3_CUCSA2E-164Uncharacterized protein {ECO:0000313|EMBL:KGN44891.1}
TAIR10AT3G62940.32E-87Cysteine proteinases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7602528876033640-
GWHAAZE00000006mRNA7602528876033640-
GWHAAZE00000006exon7602528876026140-
GWHAAZE00000006exon7602878676028877-
GWHAAZE00000006exon7603353076033640-
GWHAAZE00000006five_prime_UTR7603353076033640-
GWHAAZE00000006five_prime_UTR7602886976028877-
GWHAAZE00000006CDS7602878676028868-
GWHAAZE00000006CDS7602528876026140-
Transcript Sequence

Network for GWHGAAZE022642

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02338.20OTU1703072.30E-31
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyOTU

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.388
SRR3591706second leaf24.344
SRR3591707mature leaf22.639
SRR3591708Shoot apex32.457
SRR3591709Stem35.538
SRR3591710White floral bud53.482
SRR3591711White flower78.889
SRR3591712Green floral bud53.000
SRR3591713Yellow flower67.292
SRP173429 SRR8316895Juvenile bud stage 33.931
SRR8316896Juvenile bud stage 40.873
SRR8316897Juvenile bud stage 21.109
SRR8316894Third green stage 17.150
SRR8316900Third green stage 57.391
SRR8316901Third green stage 55.244
SRR8316898Complete white stage 25.918
SRR8316899Complete white stage 77.528
SRR8316903Complete white stage 41.513
SRR8316902Silver flowering stage38.770
SRR8316904Silver flowering stage43.165
SRR8316905Silver flowering stage24.493
SRR8316906Gold flowering stage 73.131
SRR8316907Gold flowering stage 71.815
SRR8316908Gold flowering stage 73.974
SRP132670SRR6706286Control67.226
SRR6706287Light intensity 50%60.878
SRR6706288Light intensity 20%67.677
CNP0000432CNS0095592Slightly white alabastrum(diploid) 134.667
CNS0095593Slightly white alabastrum(diploid) 240.929
CNS0095594Slightly white alabastrum(diploid) 331.531
CNS0095595Whole white alabastrum(diploid) 231.077
CNS0095596Whole white alabastrum(diploid) 329.785
CNS0095597Whole white alabastrum(diploid) 431.326
CNS0095598Silvery flower (diploied) 141.384
CNS0095599Silvery flower (diploied) 235.264
CNS0095600Silvery flower (diploied) 362.233
CNS0095601Golden flower (diploid) 133.697
CNS0095602Golden flower (diploid) 250.555
CNS0095603Golden flower (diploid) 347.951
CNS0095604Slightly white alabastrum(tetraploid) 133.993
CNS0095605Slightly white alabastrum(tetraploid) 230.591
CNS0095606Slightly white alabastrum(tetraploid) 346.190
CNS0095607Whole white alabastrum(tetraploid) 125.353
CNS0095608Whole white alabastrum(tetraploid) 224.247
CNS0095609Whole white alabastrum(tetraploid) 336.276
CNS0095610Silvery flower (tetraploid) 167.120
CNS0095611Silvery flower (tetraploid) 259.598
CNS0095612Silvery flower (tetraploid) 349.272
CNS0095613Golden flower (tetraploid) 148.802
CNS0095614Golden flower (tetraploid) 256.258
CNS0095615Golden flower (tetraploid) 351.371
CRA001975CRR073297Stem 153.222
CRR073298Stem 244.183
CRR073299Stem 349.143
CRR073300Leaf 146.711
CRR073301Leaf 254.138
CRR073302Leaf 350.732
CRR073303Juvenile bud 156.880
CRR073304Juvenile bud 245.432
CRR073305Juvenile bud 359.273
CRR073306Third green 143.926
CRR073307Third green 248.160
CRR073308Third green 347.478
CRR073309Second white 148.222
CRR073310Second white 257.061
CRR073311Second white 344.398
CRR073312Silver flowering 150.921
CRR073313Silver flowering 250.673
CRR073314Silver flowering 348.182
CRR073315Gold flowering 125.840
CRR073316Gold flowering 223.006
CRR073317Gold flowering 320.563
CRR073318Tawny withering 142.610
CRR073319Tawny withering 246.150
CRR073320Tawny withering 344.301