Detail information of GWHGAAZE022652


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010647867.10PREDICTED: transcription factor TGA2-like [Vitis vinifera]
Swissprottr|Q41558|HBP1C_WHEAT2E-152Transcription factor HBP-1b(c1) (Fragment)
trEMBLtr|D7T978|D7T978_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI27049.3}
TAIR10AT1G68640.14E-109bZIP transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7619499876200779-
GWHAAZE00000006mRNA7619499876200779-
GWHAAZE00000006exon7619499876195368-
GWHAAZE00000006exon7619550576195753-
GWHAAZE00000006exon7619583876196109-
GWHAAZE00000006exon7619658976196646-
GWHAAZE00000006exon7619826776198326-
GWHAAZE00000006exon7619841176198488-
GWHAAZE00000006exon7619904676199264-
GWHAAZE00000006exon7619935676199435-
GWHAAZE00000006exon7619955676199662-
GWHAAZE00000006exon7620070076200779-
GWHAAZE00000006CDS7620070076200779-
GWHAAZE00000006CDS7619955676199662-
GWHAAZE00000006CDS7619935676199435-
GWHAAZE00000006CDS7619904676199264-
GWHAAZE00000006CDS7619841176198488-
GWHAAZE00000006CDS7619826776198326-
GWHAAZE00000006CDS7619658976196646-
GWHAAZE00000006CDS7619583876196109-
GWHAAZE00000006CDS7619550576195753-
GWHAAZE00000006CDS7619522276195368-
GWHAAZE00000006three_prime_UTR7619499876195221-
Transcript Sequence

Network for GWHGAAZE022652

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14144.7DOG12473209.00E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14431TGA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0006351biological_processtranscription, DNA-templated
GO:0003700molecular_functionDNA-binding transcription factor activity
GO:0043565molecular_functionsequence-specific DNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.213
SRR3591706second leaf0.163
SRR3591707mature leaf0.194
SRR3591708Shoot apex1.268
SRR3591709Stem1.607
SRR3591710White floral bud0.348
SRR3591711White flower0.152
SRR3591712Green floral bud0.308
SRR3591713Yellow flower0.051
SRP173429 SRR8316895Juvenile bud stage 1.784
SRR8316896Juvenile bud stage 1.617
SRR8316897Juvenile bud stage 1.260
SRR8316894Third green stage 0.732
SRR8316900Third green stage 1.086
SRR8316901Third green stage 1.903
SRR8316898Complete white stage 0.128
SRR8316899Complete white stage 1.227
SRR8316903Complete white stage 0.405
SRR8316902Silver flowering stage0.066
SRR8316904Silver flowering stage0.314
SRR8316905Silver flowering stage0.057
SRR8316906Gold flowering stage 0.621
SRR8316907Gold flowering stage 0.240
SRR8316908Gold flowering stage 0.389
SRP132670SRR6706286Control1.142
SRR6706287Light intensity 50%1.556
SRR6706288Light intensity 20%1.522
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.698
CNS0095593Slightly white alabastrum(diploid) 20.901
CNS0095594Slightly white alabastrum(diploid) 30.834
CNS0095595Whole white alabastrum(diploid) 20.746
CNS0095596Whole white alabastrum(diploid) 30.857
CNS0095597Whole white alabastrum(diploid) 40.405
CNS0095598Silvery flower (diploied) 11.187
CNS0095599Silvery flower (diploied) 20.295
CNS0095600Silvery flower (diploied) 30.617
CNS0095601Golden flower (diploid) 11.244
CNS0095602Golden flower (diploid) 20.816
CNS0095603Golden flower (diploid) 30.568
CNS0095604Slightly white alabastrum(tetraploid) 10.997
CNS0095605Slightly white alabastrum(tetraploid) 21.095
CNS0095606Slightly white alabastrum(tetraploid) 32.680
CNS0095607Whole white alabastrum(tetraploid) 10.707
CNS0095608Whole white alabastrum(tetraploid) 20.463
CNS0095609Whole white alabastrum(tetraploid) 31.056
CNS0095610Silvery flower (tetraploid) 11.250
CNS0095611Silvery flower (tetraploid) 20.991
CNS0095612Silvery flower (tetraploid) 31.516
CNS0095613Golden flower (tetraploid) 11.131
CNS0095614Golden flower (tetraploid) 21.303
CNS0095615Golden flower (tetraploid) 30.047
CRA001975CRR073297Stem 12.596
CRR073298Stem 23.285
CRR073299Stem 31.763
CRR073300Leaf 12.202
CRR073301Leaf 22.688
CRR073302Leaf 31.328
CRR073303Juvenile bud 10.771
CRR073304Juvenile bud 20.337
CRR073305Juvenile bud 31.360
CRR073306Third green 10.187
CRR073307Third green 20.000
CRR073308Third green 30.114
CRR073309Second white 10.202
CRR073310Second white 20.149
CRR073311Second white 30.000
CRR073312Silver flowering 10.050
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.148
CRR073316Gold flowering 20.339
CRR073317Gold flowering 30.027
CRR073318Tawny withering 12.910
CRR073319Tawny withering 22.423
CRR073320Tawny withering 33.003