Detail information of GWHGAAZE022660


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010647867.10PREDICTED: transcription factor TGA2-like [Vitis vinifera]
Swissprottr|Q41558|HBP1C_WHEAT8E-109Transcription factor HBP-1b(c1) (Fragment)
trEMBLtr|D7T978|D7T978_VITVI2E-172Putative uncharacterized protein {ECO:0000313|EMBL:CBI27049.3}
TAIR10AT1G68640.18E-75bZIP transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7634868176353572-
GWHAAZE00000006mRNA7634868176353572-
GWHAAZE00000006exon7635346976353572-
GWHAAZE00000006exon7635323376353339-
GWHAAZE00000006exon7635304376353122-
GWHAAZE00000006exon7635272976352947-
GWHAAZE00000006exon7635209576352172-
GWHAAZE00000006exon7635195176352010-
GWHAAZE00000006exon7635027076350327-
GWHAAZE00000006exon7634952176349791-
GWHAAZE00000006exon7634918876349380-
GWHAAZE00000006exon7634868176349051-
GWHAAZE00000006CDS7635346976353572-
GWHAAZE00000006CDS7635323376353339-
GWHAAZE00000006CDS7635304376353122-
GWHAAZE00000006CDS7635272976352947-
GWHAAZE00000006CDS7635209576352172-
GWHAAZE00000006CDS7635195176352010-
GWHAAZE00000006CDS7635027076350327-
GWHAAZE00000006CDS7634952176349791-
GWHAAZE00000006CDS7634918876349380-
GWHAAZE00000006CDS7634890576349051-
GWHAAZE00000006three_prime_UTR7634868176348904-
Transcript Sequence

Network for GWHGAAZE022660

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14144.7DOG12552984.00E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14431TGA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006351biological_processtranscription, DNA-templated
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0043565molecular_functionsequence-specific DNA binding
GO:0003700molecular_functionDNA-binding transcription factor activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.320
SRR3591706second leaf0.252
SRR3591707mature leaf0.097
SRR3591708Shoot apex1.081
SRR3591709Stem1.532
SRR3591710White floral bud0.336
SRR3591711White flower0.209
SRR3591712Green floral bud0.595
SRR3591713Yellow flower0.042
SRP173429 SRR8316895Juvenile bud stage 1.362
SRR8316896Juvenile bud stage 1.390
SRR8316897Juvenile bud stage 0.686
SRR8316894Third green stage 0.641
SRR8316900Third green stage 1.583
SRR8316901Third green stage 1.107
SRR8316898Complete white stage 0.063
SRR8316899Complete white stage 0.638
SRR8316903Complete white stage 0.176
SRR8316902Silver flowering stage0.020
SRR8316904Silver flowering stage0.192
SRR8316905Silver flowering stage0.018
SRR8316906Gold flowering stage 0.171
SRR8316907Gold flowering stage 0.188
SRR8316908Gold flowering stage 0.322
SRP132670SRR6706286Control1.254
SRR6706287Light intensity 50%1.175
SRR6706288Light intensity 20%1.010
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.093
CNS0095593Slightly white alabastrum(diploid) 20.687
CNS0095594Slightly white alabastrum(diploid) 31.030
CNS0095595Whole white alabastrum(diploid) 20.793
CNS0095596Whole white alabastrum(diploid) 30.193
CNS0095597Whole white alabastrum(diploid) 40.715
CNS0095598Silvery flower (diploied) 11.097
CNS0095599Silvery flower (diploied) 20.259
CNS0095600Silvery flower (diploied) 30.216
CNS0095601Golden flower (diploid) 10.974
CNS0095602Golden flower (diploid) 20.563
CNS0095603Golden flower (diploid) 30.282
CNS0095604Slightly white alabastrum(tetraploid) 10.702
CNS0095605Slightly white alabastrum(tetraploid) 20.891
CNS0095606Slightly white alabastrum(tetraploid) 30.709
CNS0095607Whole white alabastrum(tetraploid) 10.299
CNS0095608Whole white alabastrum(tetraploid) 20.089
CNS0095609Whole white alabastrum(tetraploid) 30.608
CNS0095610Silvery flower (tetraploid) 10.610
CNS0095611Silvery flower (tetraploid) 20.420
CNS0095612Silvery flower (tetraploid) 30.319
CNS0095613Golden flower (tetraploid) 10.616
CNS0095614Golden flower (tetraploid) 20.621
CNS0095615Golden flower (tetraploid) 30.076
CRA001975CRR073297Stem 11.690
CRR073298Stem 21.604
CRR073299Stem 31.277
CRR073300Leaf 11.018
CRR073301Leaf 22.015
CRR073302Leaf 30.580
CRR073303Juvenile bud 10.176
CRR073304Juvenile bud 20.076
CRR073305Juvenile bud 30.476
CRR073306Third green 10.084
CRR073307Third green 20.000
CRR073308Third green 30.101
CRR073309Second white 10.014
CRR073310Second white 20.060
CRR073311Second white 30.000
CRR073312Silver flowering 10.035
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.158
CRR073316Gold flowering 20.176
CRR073317Gold flowering 30.027
CRR073318Tawny withering 10.669
CRR073319Tawny withering 20.794
CRR073320Tawny withering 31.143