Detail information of GWHGAAZE022697


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007045675.10Phosphoribulokinase / Uridine kinase family isoform 1 [Theobroma cacao]
COGYP_006427853.11E-25uridine kinase
Swissprottr|Q8VYB2|UKL3_ARATH2E-15Putative uracil phosphoribosyltransferase
trEMBLtr|A0A061EAS2|A0A061EAS2_THECC0Phosphoribulokinase / Uridine kinase family isoform 1 {ECO:0000313|EMBL:EOY01507.1}
TAIR10AT1G26190.10Phosphoribulokinase / Uridine kinase family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7710545677109521-
GWHAAZE00000006mRNA7710545677109521-
GWHAAZE00000006exon7710545677105674-
GWHAAZE00000006exon7710601677106288-
GWHAAZE00000006exon7710643477106497-
GWHAAZE00000006exon7710665777106778-
GWHAAZE00000006exon7710685477106976-
GWHAAZE00000006exon7710713177107325-
GWHAAZE00000006exon7710755277107725-
GWHAAZE00000006exon7710783677107949-
GWHAAZE00000006exon7710803277108227-
GWHAAZE00000006exon7710835077108464-
GWHAAZE00000006exon7710918577109521-
GWHAAZE00000006CDS7710918577109521-
GWHAAZE00000006CDS7710835077108464-
GWHAAZE00000006CDS7710803277108227-
GWHAAZE00000006CDS7710783677107949-
GWHAAZE00000006CDS7710755277107725-
GWHAAZE00000006CDS7710713177107325-
GWHAAZE00000006CDS7710685477106976-
GWHAAZE00000006CDS7710665777106778-
GWHAAZE00000006CDS7710643477106497-
GWHAAZE00000006CDS7710601677106288-
GWHAAZE00000006CDS7710545677105674-
Transcript Sequence

Network for GWHGAAZE022697

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00485.19PRK682361.20E-23
PF01928.22CYTH2724047.60E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00876udk, UCK Metabolic pathways map01100
Pyrimidine metabolismmap00240
Drug metabolism - other enzymesmap00983

Gene Ontology

GO term OntologyName
GO:0005524molecular_functionATP binding
GO:0016301molecular_functionkinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf25.526
SRR3591706second leaf11.845
SRR3591707mature leaf31.000
SRR3591708Shoot apex13.629
SRR3591709Stem42.920
SRR3591710White floral bud14.172
SRR3591711White flower65.509
SRR3591712Green floral bud11.355
SRR3591713Yellow flower54.297
SRP173429 SRR8316895Juvenile bud stage 15.797
SRR8316896Juvenile bud stage 22.438
SRR8316897Juvenile bud stage 9.929
SRR8316894Third green stage 6.920
SRR8316900Third green stage 12.515
SRR8316901Third green stage 13.590
SRR8316898Complete white stage 4.508
SRR8316899Complete white stage 19.795
SRR8316903Complete white stage 9.759
SRR8316902Silver flowering stage9.403
SRR8316904Silver flowering stage13.007
SRR8316905Silver flowering stage5.377
SRR8316906Gold flowering stage 21.809
SRR8316907Gold flowering stage 18.058
SRR8316908Gold flowering stage 26.483
SRP132670SRR6706286Control11.749
SRR6706287Light intensity 50%10.253
SRR6706288Light intensity 20%8.869
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.797
CNS0095593Slightly white alabastrum(diploid) 210.399
CNS0095594Slightly white alabastrum(diploid) 314.309
CNS0095595Whole white alabastrum(diploid) 212.817
CNS0095596Whole white alabastrum(diploid) 38.839
CNS0095597Whole white alabastrum(diploid) 49.540
CNS0095598Silvery flower (diploied) 136.233
CNS0095599Silvery flower (diploied) 225.491
CNS0095600Silvery flower (diploied) 330.388
CNS0095601Golden flower (diploid) 126.466
CNS0095602Golden flower (diploid) 241.186
CNS0095603Golden flower (diploid) 336.518
CNS0095604Slightly white alabastrum(tetraploid) 114.701
CNS0095605Slightly white alabastrum(tetraploid) 210.810
CNS0095606Slightly white alabastrum(tetraploid) 313.796
CNS0095607Whole white alabastrum(tetraploid) 17.981
CNS0095608Whole white alabastrum(tetraploid) 27.322
CNS0095609Whole white alabastrum(tetraploid) 39.655
CNS0095610Silvery flower (tetraploid) 132.674
CNS0095611Silvery flower (tetraploid) 226.444
CNS0095612Silvery flower (tetraploid) 38.601
CNS0095613Golden flower (tetraploid) 126.170
CNS0095614Golden flower (tetraploid) 233.910
CNS0095615Golden flower (tetraploid) 310.991
CRA001975CRR073297Stem 19.960
CRR073298Stem 28.147
CRR073299Stem 36.140
CRR073300Leaf 15.795
CRR073301Leaf 26.591
CRR073302Leaf 33.719
CRR073303Juvenile bud 13.497
CRR073304Juvenile bud 21.746
CRR073305Juvenile bud 34.508
CRR073306Third green 10.747
CRR073307Third green 20.394
CRR073308Third green 30.626
CRR073309Second white 11.623
CRR073310Second white 21.803
CRR073311Second white 31.895
CRR073312Silver flowering 11.783
CRR073313Silver flowering 23.583
CRR073314Silver flowering 34.496
CRR073315Gold flowering 14.843
CRR073316Gold flowering 210.495
CRR073317Gold flowering 33.175
CRR073318Tawny withering 15.918
CRR073319Tawny withering 210.384
CRR073320Tawny withering 35.550