Detail information of GWHGAAZE022752


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009794399.12.3296E-124PREDICTED: 14-3-3-like protein GF14 iota [Nicotiana sylvestris]
Swissprottr|Q9C5W6|14312_ARATH1E-11914-3-3-like protein GF14 iota
trEMBLtr|F6HF87|F6HF87_VITVI2E-124Putative uncharacterized protein {ECO:0000313|EMBL:CCB51074.1}
TAIR10AT1G26480.12E-95general regulatory factor 12

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7801992278022397-
GWHAAZE00000006mRNA7801992278022397-
GWHAAZE00000006exon7801992278020248-
GWHAAZE00000006exon7802049278020553-
GWHAAZE00000006exon7802077478020922-
GWHAAZE00000006exon7802124478021348-
GWHAAZE00000006exon7802209378022397-
GWHAAZE00000006CDS7802209378022397-
GWHAAZE00000006CDS7802124478021348-
GWHAAZE00000006CDS7802077478020922-
GWHAAZE00000006CDS7802049278020553-
GWHAAZE00000006CDS7802024378020248-
GWHAAZE00000006three_prime_UTR7801992278020242-
Transcript Sequence

Network for GWHGAAZE022752

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00244.212014/3/311329.70E-54
PF00244.212014/3/31381795.80E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06630YWHAE MAPK signaling pathway - yeast map04011
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0019904molecular_functionprotein domain specific binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.812
SRR3591706second leaf0.908
SRR3591707mature leaf0.243
SRR3591708Shoot apex4.323
SRR3591709Stem2.446
SRR3591710White floral bud141.043
SRR3591711White flower5.794
SRR3591712Green floral bud321.644
SRR3591713Yellow flower3.716
SRP173429 SRR8316895Juvenile bud stage 71.336
SRR8316896Juvenile bud stage 180.124
SRR8316897Juvenile bud stage 89.977
SRR8316894Third green stage 64.806
SRR8316900Third green stage 251.960
SRR8316901Third green stage 238.483
SRR8316898Complete white stage 0.202
SRR8316899Complete white stage 1.646
SRR8316903Complete white stage 0.458
SRR8316902Silver flowering stage1.183
SRR8316904Silver flowering stage3.274
SRR8316905Silver flowering stage1.055
SRR8316906Gold flowering stage 1.616
SRR8316907Gold flowering stage 0.483
SRR8316908Gold flowering stage 0.405
SRP132670SRR6706286Control54.723
SRR6706287Light intensity 50%57.444
SRR6706288Light intensity 20%48.901
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1213.341
CNS0095593Slightly white alabastrum(diploid) 2146.519
CNS0095594Slightly white alabastrum(diploid) 3255.927
CNS0095595Whole white alabastrum(diploid) 2266.094
CNS0095596Whole white alabastrum(diploid) 3334.312
CNS0095597Whole white alabastrum(diploid) 4297.306
CNS0095598Silvery flower (diploied) 17.522
CNS0095599Silvery flower (diploied) 221.526
CNS0095600Silvery flower (diploied) 34.800
CNS0095601Golden flower (diploid) 18.323
CNS0095602Golden flower (diploid) 26.082
CNS0095603Golden flower (diploid) 34.985
CNS0095604Slightly white alabastrum(tetraploid) 1370.429
CNS0095605Slightly white alabastrum(tetraploid) 2382.252
CNS0095606Slightly white alabastrum(tetraploid) 30.741
CNS0095607Whole white alabastrum(tetraploid) 1539.878
CNS0095608Whole white alabastrum(tetraploid) 2590.284
CNS0095609Whole white alabastrum(tetraploid) 3347.649
CNS0095610Silvery flower (tetraploid) 12.340
CNS0095611Silvery flower (tetraploid) 29.745
CNS0095612Silvery flower (tetraploid) 327.477
CNS0095613Golden flower (tetraploid) 14.552
CNS0095614Golden flower (tetraploid) 20.805
CNS0095615Golden flower (tetraploid) 319.962
CRA001975CRR073297Stem 174.482
CRR073298Stem 264.362
CRR073299Stem 342.947
CRR073300Leaf 1119.678
CRR073301Leaf 295.051
CRR073302Leaf 380.968
CRR073303Juvenile bud 1121.201
CRR073304Juvenile bud 2157.157
CRR073305Juvenile bud 38.858
CRR073306Third green 155.120
CRR073307Third green 288.596
CRR073308Third green 364.704
CRR073309Second white 15.036
CRR073310Second white 211.639
CRR073311Second white 312.609
CRR073312Silver flowering 160.963
CRR073313Silver flowering 251.317
CRR073314Silver flowering 328.626
CRR073315Gold flowering 166.654
CRR073316Gold flowering 212.927
CRR073317Gold flowering 350.318
CRR073318Tawny withering 150.136
CRR073319Tawny withering 254.472
CRR073320Tawny withering 349.001