Detail information of GWHGAAZE022797


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002269607.10PREDICTED: beta-1,3-galactosyltransferase 15 [Vitis vinifera]
Swissprottr|Q8L7F9|B3GTF_ARATH0Beta-1,3-galactosyltransferase 15
trEMBLtr|D7TN76|D7TN76_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI31949.3}
TAIR10AT1G26810.10galactosyltransferase1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7869716778702120-
GWHAAZE00000006mRNA7869716778702120-
GWHAAZE00000006exon7869716778697376-
GWHAAZE00000006exon7869761178697718-
GWHAAZE00000006exon7869880478699184-
GWHAAZE00000006exon7869998078700261-
GWHAAZE00000006exon7870035278700569-
GWHAAZE00000006exon7870136178702120-
GWHAAZE00000006CDS7870136178702120-
GWHAAZE00000006CDS7870035278700569-
GWHAAZE00000006CDS7869998078700261-
GWHAAZE00000006CDS7869880478699184-
GWHAAZE00000006CDS7869761178697718-
GWHAAZE00000006CDS7869716778697376-
Transcript Sequence

Network for GWHGAAZE022797

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00337.23Gal-bind_lectin1633483.50E-36
PF01762.22Galactosyl_T3924698.10E-13
PF01762.22Galactosyl_T4886001.00E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14413GALT1 Metabolic pathways map01100
Various types of N-glycan biosynthesismap00513

Gene Ontology

GO term OntologyName
GO:0006486biological_processprotein glycosylation
GO:0016020cellular_componentmembrane
GO:0030246molecular_functioncarbohydrate binding
GO:0008378molecular_functiongalactosyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.828
SRR3591706second leaf22.494
SRR3591707mature leaf21.321
SRR3591708Shoot apex31.091
SRR3591709Stem34.228
SRR3591710White floral bud17.462
SRR3591711White flower19.547
SRR3591712Green floral bud16.716
SRR3591713Yellow flower8.851
SRP173429 SRR8316895Juvenile bud stage 12.718
SRR8316896Juvenile bud stage 16.095
SRR8316897Juvenile bud stage 6.179
SRR8316894Third green stage 6.994
SRR8316900Third green stage 14.546
SRR8316901Third green stage 14.617
SRR8316898Complete white stage 4.985
SRR8316899Complete white stage 16.854
SRR8316903Complete white stage 8.979
SRR8316902Silver flowering stage3.621
SRR8316904Silver flowering stage6.057
SRR8316905Silver flowering stage2.703
SRR8316906Gold flowering stage 7.733
SRR8316907Gold flowering stage 6.794
SRR8316908Gold flowering stage 10.187
SRP132670SRR6706286Control4.615
SRR6706287Light intensity 50%6.133
SRR6706288Light intensity 20%6.100
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.370
CNS0095593Slightly white alabastrum(diploid) 28.142
CNS0095594Slightly white alabastrum(diploid) 35.905
CNS0095595Whole white alabastrum(diploid) 26.764
CNS0095596Whole white alabastrum(diploid) 35.450
CNS0095597Whole white alabastrum(diploid) 45.468
CNS0095598Silvery flower (diploied) 19.983
CNS0095599Silvery flower (diploied) 28.543
CNS0095600Silvery flower (diploied) 39.144
CNS0095601Golden flower (diploid) 18.333
CNS0095602Golden flower (diploid) 29.110
CNS0095603Golden flower (diploid) 39.200
CNS0095604Slightly white alabastrum(tetraploid) 110.482
CNS0095605Slightly white alabastrum(tetraploid) 27.786
CNS0095606Slightly white alabastrum(tetraploid) 318.675
CNS0095607Whole white alabastrum(tetraploid) 14.831
CNS0095608Whole white alabastrum(tetraploid) 23.492
CNS0095609Whole white alabastrum(tetraploid) 310.041
CNS0095610Silvery flower (tetraploid) 111.025
CNS0095611Silvery flower (tetraploid) 29.820
CNS0095612Silvery flower (tetraploid) 36.982
CNS0095613Golden flower (tetraploid) 14.790
CNS0095614Golden flower (tetraploid) 29.732
CNS0095615Golden flower (tetraploid) 33.847
CRA001975CRR073297Stem 111.688
CRR073298Stem 28.384
CRR073299Stem 36.572
CRR073300Leaf 18.103
CRR073301Leaf 26.504
CRR073302Leaf 36.115
CRR073303Juvenile bud 16.028
CRR073304Juvenile bud 24.765
CRR073305Juvenile bud 36.241
CRR073306Third green 12.435
CRR073307Third green 23.055
CRR073308Third green 32.314
CRR073309Second white 11.475
CRR073310Second white 21.457
CRR073311Second white 31.350
CRR073312Silver flowering 11.222
CRR073313Silver flowering 21.528
CRR073314Silver flowering 30.390
CRR073315Gold flowering 12.659
CRR073316Gold flowering 28.047
CRR073317Gold flowering 32.781
CRR073318Tawny withering 113.493
CRR073319Tawny withering 29.874
CRR073320Tawny withering 319.624