Gene detail

Detail information of GWHGAAZE022801

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009616750.1	0	PREDICTED: probable apyrase 6 [Nicotiana tomentosiformis]
COG	YP_007567828.1	6E-20	hypothetical protein LPE509_01285
Swissprot	tr\|O80612\|APY6_ARATH	0	Probable apyrase 6
trEMBL	tr\|K4BWU2\|K4BWU2_SOLLC	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc05g007670.2.1}
TAIR10	AT2G02970.1	3E-160	GDA1/CD39 nucleoside phosphatase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	78742109	78745899	+
GWHAAZE00000006	mRNA	78742109	78745899	+
GWHAAZE00000006	exon	78742109	78742709	+
GWHAAZE00000006	exon	78743059	78743171	+
GWHAAZE00000006	exon	78743434	78743541	+
GWHAAZE00000006	exon	78743873	78743927	+
GWHAAZE00000006	exon	78744234	78744425	+
GWHAAZE00000006	exon	78744540	78744637	+
GWHAAZE00000006	exon	78744779	78744975	+
GWHAAZE00000006	exon	78745481	78745899	+
GWHAAZE00000006	CDS	78742109	78742709	+
GWHAAZE00000006	CDS	78743059	78743171	+
GWHAAZE00000006	CDS	78743434	78743541	+
GWHAAZE00000006	CDS	78743873	78743927	+
GWHAAZE00000006	CDS	78744234	78744425	+
GWHAAZE00000006	CDS	78744540	78744637	+
GWHAAZE00000006	CDS	78744779	78744975	+
GWHAAZE00000006	CDS	78745481	78745757	+
GWHAAZE00000006	three_prime_UTR	78745758	78745899	+

Transcript Sequence
>GWHTAAZE022831 ATGCGACGATCGAATGCTCCAAGAACATCCAACAACACAACCAATATGGACTCCATCAAGCTTCAATTACGCCATAATCCTTCCCTTCATCGATCCACTAATCTCTTTTCTCGAAACCCCAAACACACCAAACCAAACTTCATCCTCTTCACATCAATCTCACTACTAATCCTCGCACTATTCTCTTATTTATTATTTTCCTCCACAACTTCTAGAAACTCATCCAATCGTAAATTCTGGATTGTGATAGACGGAGGAAGTACTGGGACACGAATACATATCTTCGACTATAGAGTTATTAATGGAGTTCCGGTTTTTGATTTTGGGAAGAATGGGTTGGTGTCGATGCGGGTCAACCCGGGGTTGTCTTCGTACGCCGAGGATCCGGAGGGGGCGGGTGGGTCATTGTCGGAGCTGGTGGACTTTGGAAGGAAGAGGATTCCGATGGAGCACTGGGGGAATACGGACATTCGGCTAATGGCAACAGCAGGGCTTAGAATGCTGCAGATTGAGGTGCAGGACCGGATTTTGGAGTCTTGCCGGAGGGTTCTGAGGTCGTCCGGATTCAAGTTTAAGGATGATTGGGCATCCGTTATTTCGGGCTCGGATGAGGGGATATATGCTTGGGTTGTTGCTAATTATGCCCTTGGCACTCTTGGAGGTGATCCTCAGAAGACAACAGGAATTATTGAACTTGGTGGTGCTTCTGCTCAGGTAACCTTTGTTTCAAGTGAGCCAATACCCCCTGAATTCTCTCATAGAGTTACGGTTGGAAATTTCAGTTACAATCTCTACAGCCATAGCCTTCTTCAATTTGGTCAGAATGCCGCATTTGAGTTATTGCGAGATTTGCTTGCTACAAGACACCTAGAATTGGCTAGCGAATCTGTTCAAAGGGGGAAACCAGTGGATCCTTGTACTCCTAGAGGGTATACACACAATGTGAAGCTGGAGAAACTCACGCCTAGTTTTGTGGCTGAAAAGAAAAGTGAACTTTCTGCTCTGCATCCCAGTGGTAACTTCTCAGAGTGCAGATCTGCCTCATTAACGCTGTTGCAGAAAGGCAAAGAGGAATGCTCCTACAAACGCTGCGACATAGGATCAACGTTCATACCCAGGCTTGAGGGAAAGTTTTTGGCAACAGAGAATTTCTTCTATACATCTAAGTTCTTTGAATTGGCCCCGCAAGCATTTCTATCTGATCTGACAGTGGCTGGACAACAATTTTGTGAAGAGGATTGGTCCAAATTGAAGAGGAAATACCCTTCACTTGATGAGGAAGATTTGCGTCGATATTGCTTCTCTTCTGCGTATATTGTAGCCCTGTTGCATGACAGTCTTGGAATCGCTCTAGATGATGAAAGGGTTGGATATGCTAATCAAGTGCAAGATATCCCTCTTGATTGGGCATTAGGAGCTTTCATCTTGCTGAGCACTGCGGACTCAAATGCAGAGGATTCCAACTGGGTTTCTACCATTGTTGGTGATGACTCTTCTTCCACATTGATTGCCCTTTTTGCCTTCTGCCTCTTCATACTGTTAACTGCATGGTCCGTGTCAAAGTTGAGGAAGCCGCAACTAAAGACAATATATGATTTAGAAAAAGGGAAATATATAGTTACGCATGTTGGTGGATATTGATCGTAGCTTCTTTTTCTAGGAGATTGAAGCCCTTAATCCTGGTTTTTGGAAATTTTCCGGATGAAGGAGCTCTGAGTAGTCAATCTCTCTTGCTCACTCTTGGTGCTATTTCATGGAAGATATATTGTTGTACATCCTGCAG

Network for GWHGAAZE022801

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01150.18	GDA1_CD39	73	482	4.40E-81

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01510	ENTPD1_3_8, CD39	Metabolic pathways	map01100
		Purine metabolism	map00230
		Pyrimidine metabolism	map00240

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	60.528
	SRR3591706	second leaf	18.878
	SRR3591707	mature leaf	19.880
	SRR3591708	Shoot apex	31.673
	SRR3591709	Stem	50.282
	SRR3591710	White floral bud	92.209
	SRR3591711	White flower	44.671
	SRR3591712	Green floral bud	95.905
	SRR3591713	Yellow flower	40.515
SRP173429	SRR8316895	Juvenile bud stage	36.611
	SRR8316896	Juvenile bud stage	66.728
	SRR8316897	Juvenile bud stage	31.789
	SRR8316894	Third green stage	22.367
	SRR8316900	Third green stage	70.120
	SRR8316901	Third green stage	76.786
	SRR8316898	Complete white stage	19.000
	SRR8316899	Complete white stage	62.797
	SRR8316903	Complete white stage	26.372
	SRR8316902	Silver flowering stage	18.922
	SRR8316904	Silver flowering stage	26.088
	SRR8316905	Silver flowering stage	12.085
	SRR8316906	Gold flowering stage	42.978
	SRR8316907	Gold flowering stage	35.574
	SRR8316908	Gold flowering stage	41.066
SRP132670	SRR6706286	Control	38.211
	SRR6706287	Light intensity 50%	40.454
	SRR6706288	Light intensity 20%	39.040
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	81.556
	CNS0095593	Slightly white alabastrum(diploid) 2	69.512
	CNS0095594	Slightly white alabastrum(diploid) 3	87.748
	CNS0095595	Whole white alabastrum(diploid) 2	114.010
	CNS0095596	Whole white alabastrum(diploid) 3	117.232
	CNS0095597	Whole white alabastrum(diploid) 4	129.895
	CNS0095598	Silvery flower (diploied) 1	41.238
	CNS0095599	Silvery flower (diploied) 2	39.500
	CNS0095600	Silvery flower (diploied) 3	50.551
	CNS0095601	Golden flower (diploid) 1	37.720
	CNS0095602	Golden flower (diploid) 2	57.109
	CNS0095603	Golden flower (diploid) 3	56.217
	CNS0095604	Slightly white alabastrum(tetraploid) 1	99.112
	CNS0095605	Slightly white alabastrum(tetraploid) 2	108.634
	CNS0095606	Slightly white alabastrum(tetraploid) 3	28.925
	CNS0095607	Whole white alabastrum(tetraploid) 1	136.610
	CNS0095608	Whole white alabastrum(tetraploid) 2	137.192
	CNS0095609	Whole white alabastrum(tetraploid) 3	83.858
	CNS0095610	Silvery flower (tetraploid) 1	31.887
	CNS0095611	Silvery flower (tetraploid) 2	32.656
	CNS0095612	Silvery flower (tetraploid) 3	35.255
	CNS0095613	Golden flower (tetraploid) 1	19.076
	CNS0095614	Golden flower (tetraploid) 2	29.619
	CNS0095615	Golden flower (tetraploid) 3	41.067
CRA001975	CRR073297	Stem 1	58.979
	CRR073298	Stem 2	54.282
	CRR073299	Stem 3	35.511
	CRR073300	Leaf 1	79.507
	CRR073301	Leaf 2	66.360
	CRR073302	Leaf 3	54.148
	CRR073303	Juvenile bud 1	61.701
	CRR073304	Juvenile bud 2	42.485
	CRR073305	Juvenile bud 3	46.652
	CRR073306	Third green 1	38.435
	CRR073307	Third green 2	32.214
	CRR073308	Third green 3	35.679
	CRR073309	Second white 1	30.599
	CRR073310	Second white 2	29.409
	CRR073311	Second white 3	30.671
	CRR073312	Silver flowering 1	55.432
	CRR073313	Silver flowering 2	53.284
	CRR073314	Silver flowering 3	46.117
	CRR073315	Gold flowering 1	27.189
	CRR073316	Gold flowering 2	38.256
	CRR073317	Gold flowering 3	20.393
	CRR073318	Tawny withering 1	66.018
	CRR073319	Tawny withering 2	65.911
	CRR073320	Tawny withering 3	60.270