Detail information of GWHGAAZE022814


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011071008.12.3262E-113PREDICTED: transcription factor TCP15-like [Sesamum indicum]
Swissprottr|Q9C9L2|TCP15_ARATH5E-59Transcription factor TCP15
trEMBLtr|F6HPD0|F6HPD0_VITVI5E-110Putative uncharacterized protein {ECO:0000313|EMBL:CCB56558.1}
TAIR10AT1G69690.17E-50TCP family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7897272678973799+
GWHAAZE00000006mRNA7897272678973799+
GWHAAZE00000006exon7897272678973799+
GWHAAZE00000006CDS7897272678973799+
Transcript Sequence

Network for GWHGAAZE022814

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP602224.40E-40
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.792
SRR3591706second leaf5.625
SRR3591707mature leaf0.722
SRR3591708Shoot apex22.675
SRR3591709Stem4.430
SRR3591710White floral bud3.854
SRR3591711White flower3.792
SRR3591712Green floral bud18.676
SRR3591713Yellow flower1.153
SRP173429 SRR8316895Juvenile bud stage 9.689
SRR8316896Juvenile bud stage 10.342
SRR8316897Juvenile bud stage 2.258
SRR8316894Third green stage 6.572
SRR8316900Third green stage 10.025
SRR8316901Third green stage 12.302
SRR8316898Complete white stage 0.403
SRR8316899Complete white stage 12.421
SRR8316903Complete white stage 1.701
SRR8316902Silver flowering stage0.978
SRR8316904Silver flowering stage0.154
SRR8316905Silver flowering stage0.128
SRR8316906Gold flowering stage 0.752
SRR8316907Gold flowering stage 0.387
SRR8316908Gold flowering stage 1.883
SRP132670SRR6706286Control15.761
SRR6706287Light intensity 50%15.253
SRR6706288Light intensity 20%16.108
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.895
CNS0095593Slightly white alabastrum(diploid) 216.465
CNS0095594Slightly white alabastrum(diploid) 310.955
CNS0095595Whole white alabastrum(diploid) 29.328
CNS0095596Whole white alabastrum(diploid) 39.800
CNS0095597Whole white alabastrum(diploid) 48.389
CNS0095598Silvery flower (diploied) 19.969
CNS0095599Silvery flower (diploied) 24.625
CNS0095600Silvery flower (diploied) 31.764
CNS0095601Golden flower (diploid) 14.751
CNS0095602Golden flower (diploid) 24.009
CNS0095603Golden flower (diploid) 33.599
CNS0095604Slightly white alabastrum(tetraploid) 123.682
CNS0095605Slightly white alabastrum(tetraploid) 220.603
CNS0095606Slightly white alabastrum(tetraploid) 356.593
CNS0095607Whole white alabastrum(tetraploid) 112.014
CNS0095608Whole white alabastrum(tetraploid) 26.946
CNS0095609Whole white alabastrum(tetraploid) 310.493
CNS0095610Silvery flower (tetraploid) 11.493
CNS0095611Silvery flower (tetraploid) 24.027
CNS0095612Silvery flower (tetraploid) 32.280
CNS0095613Golden flower (tetraploid) 10.518
CNS0095614Golden flower (tetraploid) 21.915
CNS0095615Golden flower (tetraploid) 30.343
CRA001975CRR073297Stem 147.888
CRR073298Stem 248.235
CRR073299Stem 345.569
CRR073300Leaf 131.612
CRR073301Leaf 239.333
CRR073302Leaf 325.297
CRR073303Juvenile bud 119.411
CRR073304Juvenile bud 23.069
CRR073305Juvenile bud 331.200
CRR073306Third green 15.417
CRR073307Third green 23.342
CRR073308Third green 33.052
CRR073309Second white 10.488
CRR073310Second white 20.376
CRR073311Second white 30.000
CRR073312Silver flowering 10.088
CRR073313Silver flowering 20.050
CRR073314Silver flowering 30.083
CRR073315Gold flowering 11.139
CRR073316Gold flowering 21.310
CRR073317Gold flowering 32.272
CRR073318Tawny withering 114.714
CRR073319Tawny withering 28.946
CRR073320Tawny withering 33.217